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SCN18_13_7_16_R2_B_scaffold_39644_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 646..1263

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5259D similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 193.0
  • Bit_score: 268
  • Evalue 3.90e-69
protein-export membrane protein SecD similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 185.0
  • Bit_score: 240
  • Evalue 3.30e-61
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 185.0
  • Bit_score: 240
  • Evalue 1.60e-60

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGATCATCTACTCGCTGCTGTACTACCGCGGCCTGGGTCTGGTCACGATCGCCTCGCTGATCGTCTCGGCGACGCTCACCTACGCGATGCTGGTGATCCTCGCGACCCAGATGGGCTTCACCCTCGACCTCTCCGGCATCGCCGGCTTCATCGTGGCGCTGGGCATCACCGCGGACTCGTTCGTCGTCTTCTTCGAACGAATAAAGGACGAAGTGCACGAGGGGAGATCTCTGCGCGTCGCCGTGCCACGGGCGTGGGTCCGGGCCCGGCGGACGATCCTCTCCGCCGACACGGTCTCCTTCCTCGCCGCGGCGATCCTGTACTACTTCGCCTCGGCCGACGTGAAGGGCTTCGCCTTCACCCTGGGCATGTCGACGATCCTCGACCTGGTCGTCGTCTTCCTCTTCACCCACCCGATGGTCTCGCTGCTCTCTAGGAGCCGGGCCTTCGGCTCGCCCCGCTTCACCGGCCTCAACTCGGTGCGCGAAGGCGGCATCTCGACCGTCGACAGCGACGACGAGCTGCCCGCCCGGCGCCGGCGCCCGGCCCGCGCCGGACGGCCGACCGGGCCGGCCACGAAGGCCGGCACCGCCGTCCTGGAGGCGCCCGAGGAGGCC
PROTEIN sequence
Length: 206
VIIYSLLYYRGLGLVTIASLIVSATLTYAMLVILATQMGFTLDLSGIAGFIVALGITADSFVVFFERIKDEVHEGRSLRVAVPRAWVRARRTILSADTVSFLAAAILYYFASADVKGFAFTLGMSTILDLVVVFLFTHPMVSLLSRSRAFGSPRFTGLNSVREGGISTVDSDDELPARRRRPARAGRPTGPATKAGTAVLEAPEEA