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SCN18_13_7_16_R2_B_scaffold_27881_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(47..691)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B32A45 similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 210.0
  • Bit_score: 261
  • Evalue 6.50e-67
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 210.0
  • Bit_score: 236
  • Evalue 4.90e-60
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 210.0
  • Bit_score: 236
  • Evalue 2.40e-59

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGTCCGAGGTCCGACTGCCCGCCGAGACGCGTACCGAGTTCGGCAAGGGTGGCGCGCGCCGCACCCGCCGCGCAGGCAAGGTGCCGGCCGTGATCTACGGCCACGGCGCCGACCCGCGCCACGTCGCCCTCCCGGCCCGCGAGTTCGCCAACGCCATTCGTCACGGTGGCAGCAACGTGCTGCTGACCCTCGACATCGAGGGCGGCGAGCAGCTTGCCATCCCGAAGTCGATCCAGCGTCACCCGATCAAGGGCTACTTCGAGCACGTCGACCTGCTGGCCGTGCGCCGCGGTGAGAAGGTCACCATCGACGTCCCGCTGAACGTCATCGGCGACGTCGTCTCCGGCGGCCTGCTCAACCAGGAGCACACGACCGTCAGCGTCGAGGCCGAGGCGACCCACCTCCCCACCGGCTTCGACGTCGACGTCGCCGCTCTGGAGATCGGCAGCCAGGTCACCGCCGGCAGCCTCGAGCTGCCGCCGGGGTCGGTGCTGATCACCGACCCGGAGACGGTGCTGCTCATCGTCGCCGAGGCGCCGACCGCGGCCGAGCTCGAGGCCGAGGGCGCGGGCGAGGGGGCCGAGTCGGCCGAGGGCGGGACCGAGGCGCCGGCCGCCGAGGGCGACGCCCCCGCCGGCGAGTAG
PROTEIN sequence
Length: 215
VSEVRLPAETRTEFGKGGARRTRRAGKVPAVIYGHGADPRHVALPAREFANAIRHGGSNVLLTLDIEGGEQLAIPKSIQRHPIKGYFEHVDLLAVRRGEKVTIDVPLNVIGDVVSGGLLNQEHTTVSVEAEATHLPTGFDVDVAALEIGSQVTAGSLELPPGSVLITDPETVLLIVAEAPTAAELEAEGAGEGAESAEGGTEAPAAEGDAPAGE*