ggKbase home page

SCN18_14_9_16_R4_B_scaffold_4868_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(701..1990)

Top 3 Functional Annotations

Value Algorithm Source
Prophage LambdaBa04, site-specific recombinase, phage integrase family n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GHY7_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 429.0
  • Bit_score: 790
  • Evalue 8.10e-226
int; site-specific recombinase similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 429.0
  • Bit_score: 790
  • Evalue 2.30e-226
Prophage LambdaBa04, site-specific recombinase, phage integrase family {ECO:0000313|EMBL:CBL55709.1}; TaxID=754252 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 /; CIP 103027 / CIRM-BIA1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 429.0
  • Bit_score: 790
  • Evalue 1.10e-225

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1290
ATGGCATCACGCACAACGCCACCAGAGCCCACAGACGGCGACGCTAAGGGGGCGCCGAGTGCGCAGGCTCGTCGCCCGCGCACTCGGCGTCGTGGGCGCGGGTCGATCCAGTCGTACCCGACCGCTACGGGGAAGCGGTGGCGGTATCAGATCTGGGTACCCATCGACCCGGAGCAGCCCGACCTTGGGGAGAAGAAGTTCAGCCGGGGCGGGTTCGCGACCGCCGCCGATGCGGACGCTGCGTTGCAGGACGCGCTCAAGCAGCGGGATCAGCAGGAGAAGTTCGGAGGGAAGGTGCCCACCCTCGGCGTCTACGCCGACGCCTGGGTAGAAGGGCTCAAACTCGCGGACTCCACCATCGCCGGCTACAAGAAGATCATCCGCAACCACCTGCGCCCGCAGCTCGGGCACTATCCGCTCGACAAGCTCACGCCCACCCGGATCGCTCGCCACTACCGCGAGTTGGAGCAGCACGGGAGGAAGGACGAGCAGGACAAGGGCGGGCCGCTGTCGGCCAACACCGTCCACAATGCTCACGTCGTGCTCGGTGCGATCTTCGACGCCGCAATCGAGGACGGGCACATCGCCACCAACCCCGCCAAGCGGAGAGCGGCGAAGGCGCCGACCACGAGCCAGATGCGCGCCGAGAAGCCCGAGCTGGTGACGTGGACGGCCGATCAGCTCGCCGCGTTCCTCGCGTGGGATCGCGACGAGAAGCAGGACGAGCTGTTCGCCCTGTGGTGGGTGATCGCGAACACGGGTATGCGACGCAGCGAAGCCCTCGCGCTGAAGTGGAACGACCTGAACACCACAACCTCGCAGATCAGCATCCGCCGCGCGATCAACACCGAGGACTGGACGAAGACGAAGACCACCAAGACCGGAAACGCCCGCGTCATCGACCTCGACACCACAACCGTGAAAGTGCTCGCCTCCTACAAGGTCGCCCGCGCCGAGCTGTCGTTCGAGTTGGCGAGGGCCGACGCGTACATATTCGGCGACGACGACGGTCAGCCCCGCTCACCCGACGCAATGACGAGCCGCTGGGATCGCCGCCTCAAGTGGGCCGCGAGGGTCAAGAAGTTCGAGCACCTGCCCCGCGTCACCCTCAAAGGACTCCGGCACACGCACGCGACGATCCTCATGGAACTCGGCGTGCCGCCCAAGGTCGTGCAGGAACGCCTTGGGCACTCGACCATCACCACGACGATGAACATCTACAGCCACGTCACCCCGACGATGCAGAAGAACGCCGTGGAACAGTTCGCAGGCCGCCTCGCCGGAACCTGA
PROTEIN sequence
Length: 430
MASRTTPPEPTDGDAKGAPSAQARRPRTRRRGRGSIQSYPTATGKRWRYQIWVPIDPEQPDLGEKKFSRGGFATAADADAALQDALKQRDQQEKFGGKVPTLGVYADAWVEGLKLADSTIAGYKKIIRNHLRPQLGHYPLDKLTPTRIARHYRELEQHGRKDEQDKGGPLSANTVHNAHVVLGAIFDAAIEDGHIATNPAKRRAAKAPTTSQMRAEKPELVTWTADQLAAFLAWDRDEKQDELFALWWVIANTGMRRSEALALKWNDLNTTTSQISIRRAINTEDWTKTKTTKTGNARVIDLDTTTVKVLASYKVARAELSFELARADAYIFGDDDGQPRSPDAMTSRWDRRLKWAARVKKFEHLPRVTLKGLRHTHATILMELGVPPKVVQERLGHSTITTTMNIYSHVTPTMQKNAVEQFAGRLAGT*