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SCN18_14_9_16_R4_B_scaffold_4072_6

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(3342..3758)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 135.0
  • Bit_score: 177
  • Evalue 1.10e-41
twitching motility protein PilT n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C6CD0 similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 134.0
  • Bit_score: 184
  • Evalue 3.80e-44
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 138.0
  • Bit_score: 141
  • Evalue 1.80e-31

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Taxonomy

CN-SCN_Microbacterium_200x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 417
GTGAAGTATCTCCGTGACACACACATTCTGAGCGACGCGCGAGCGCAGCGTTCGCATTCTTTGATGACTTGGCTCAAAAGCATGCTGATCGAGGATCTGGCGATCAGCGTGATCACCGTGTTCGAGCTCGAAAAGGGCGTGCGCCGCCTCGAGCGGAAAGACCCAGCGGGGGCTGCGCCATTGCGGCGTTGGCTCGACGGTGAAGTTCGGGTGCTATTCGCCTCGCGTGTTCTGCCCGTCGATGAACAGGTTGCGCTGGCTGCAGCTCCGCTGCATGTGCCTGATCCGATACCGGAGCTGGACGCGCTTGTCGCGGCGACCGCGCTGGTGCAGAACCTCACGCTCGTGACGCGGAACGTGAAGGACTTCGCGGGCACCGGAGTACGACTGCTCAACCCCTGGGAATCCGCGGACTGA
PROTEIN sequence
Length: 139
VKYLRDTHILSDARAQRSHSLMTWLKSMLIEDLAISVITVFELEKGVRRLERKDPAGAAPLRRWLDGEVRVLFASRVLPVDEQVALAAAPLHVPDPIPELDALVAATALVQNLTLVTRNVKDFAGTGVRLLNPWESAD*