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SCN18_14_9_16_R4_B_scaffold_3353_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(227..1807)

Top 3 Functional Annotations

Value Algorithm Source
signal recognition particle n=1 Tax=Leucobacter salsicius RepID=UPI0003466816 similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 524.0
  • Bit_score: 871
  • Evalue 2.60e-250
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 524.0
  • Bit_score: 870
  • Evalue 8.10e-250
ffh; signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 528.0
  • Bit_score: 792
  • Evalue 5.70e-227

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Taxonomy

SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 → SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1581
ATGGGCACTATGGCAACTTTCGGAAACCTCTCCGCGCGGCTCACCGACACCTTCGCGAAACTGCGCACGAAGGGCAAGCTCTCGGCAGCCGACGTCGACGGCACGGTTCGCGAGATCCGCCGCGCTCTGCTCGAGGCCGACGTCTCGCTCGACGTGGTCAAGGACTTCACCGGCAAGGTGCGCGAGCGCGCGCTCGGCGACGAGGTCAACCGCGCGCTGAACCCCGCCCAGCAGGTCGTGCAGATCGTCAACGAAGAGCTGATCGGCATTCTCGGCGGCGAGCAGCGCCGCCTCGAGTTCGCCAAGCAGCCCCCCACGGTCATCATGCTCGCGGGCCTGCAGGGCGCGGGCAAGACCACGCTCGCGGGCAAGCTGGCGAAGTGGCTGAAGGATCAGGGCCACACGCCGCTGCTGGTCGCCTGCGATCTGCAGCGCCCCAACGCCGTCACCCAGCTCGGCGTCGTCGCCGAGCAGGCCGGAGTGGCCATCTACGCGCCCGAGCCCGGCAACGGGGTGGGTGACCCGGTGAAGGTCGCCAAGAACGGTGTGGCCGAGGCCCGCACCAAGCAGCACGATTTCGTGATCGTCGATACCGCCGGCCGTTTGGGCGTCGATGCCGAGATGATGAAGCAGGCGAGCGACATCCGCAAGGCGATCGATCCCGACGAGGTACTCTTCGTCATCGACGCCATGATCGGTCAAGACGCGGTCGCGACGGCCAAGGCCTTCCAGGAGGGCGTGGACTTCACCGGCGTGGTGCTGACCAAGCTCGACGGCGACGCTCGCGGCGGTGCCGCGCTCTCGATCCGCGGCGTGACCGGCAAGCCGATCCTCTTCGCCTCGACCGGTGAGGGGCTTGGGGACTTCGAGCCTTTCCATCCGGATCGCATGGCGAGCCGCATTCTCGATCTCGGCGATGTGCTCACCCTGATCGAGCAGGCGCAGCAGGCCTTCGACGAGGATGAGGCGCGCAAGGTCGCCGAGAAGATCGCCAGCGACCAGTTCACGCTCGACGACTTCCTCAAGCAGATGCAGCAGCTGCGCGGGGCCGGCTCGATCCAGAAGATGATGGGCATGCTGCCCGGCATGGGCAAGATGAAGGATCAGCTCGCCAATTTCGACGAGCGCGAGATCCTGCACACCGAGGCCATCATCCAGTCGATGACGCCCGACGAGCGCGCGAACCCCAAGCTGCTGAACGGCTCGCGCCGTCTGCGCATCGCCAAGGGCTCCGGCATGACGGTGACCGACGTGAACTCGCTGGTCAACCGCTTCGAGCAGGCCGCGAAGATGATGAAGACCGTGGCGAAGGGCGGCGTGCCGCAGATCCCCGGGATGGGGCCGATGCCGGGCATGGGCGGCGGTTACGCGGGCAAGAAGAAGCAGCAGGCCAAGGGCAAGGGCGCCAAGAGAAGCGGCAACCCGGCCAAGCGCGCGGCCGAGGCGACGGGCAAGCCGATCGCGCCCGCGCAGAGCGGATCGGGCTTCGGCCTGGGTGCGGGTGGCGGCGCGGCTGCCTCCGGCGGTGCGGGTCAACCGGATCTGAGCGAGCTGCAGAACATGCTGAGGCGTGGACGCTAG
PROTEIN sequence
Length: 527
MGTMATFGNLSARLTDTFAKLRTKGKLSAADVDGTVREIRRALLEADVSLDVVKDFTGKVRERALGDEVNRALNPAQQVVQIVNEELIGILGGEQRRLEFAKQPPTVIMLAGLQGAGKTTLAGKLAKWLKDQGHTPLLVACDLQRPNAVTQLGVVAEQAGVAIYAPEPGNGVGDPVKVAKNGVAEARTKQHDFVIVDTAGRLGVDAEMMKQASDIRKAIDPDEVLFVIDAMIGQDAVATAKAFQEGVDFTGVVLTKLDGDARGGAALSIRGVTGKPILFASTGEGLGDFEPFHPDRMASRILDLGDVLTLIEQAQQAFDEDEARKVAEKIASDQFTLDDFLKQMQQLRGAGSIQKMMGMLPGMGKMKDQLANFDEREILHTEAIIQSMTPDERANPKLLNGSRRLRIAKGSGMTVTDVNSLVNRFEQAAKMMKTVAKGGVPQIPGMGPMPGMGGGYAGKKKQQAKGKGAKRSGNPAKRAAEATGKPIAPAQSGSGFGLGAGGGAAASGGAGQPDLSELQNMLRRGR*