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SCN18_14_9_16_R4_B_scaffold_4478_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(91..2886)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 932.0
  • Bit_score: 1753
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036D3ABE similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 932.0
  • Bit_score: 1753
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 931.0
  • Bit_score: 1566
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 → SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2796
TTGGCTGCTGCGCGCAACGCATCCACCAATTCACCCAAGAACGGCCGCAACCACTCGCGGCTTTCGTTCGCCAAGATTTCCGACACACTGACGGTGCCCAATCTGCTGGCACTGCAGCTCGAGAGCTTTGACTGGCTCGTCGGCAACGACGCATGGAAAGAGCGCGTCGTCCAGGCTCAGAAGGACGGGCGCGATGACATCGCCCTGAAGAGCGGCCTGGAAGAGATCTTCGATGAGATCTCGCCGATCGAAGACAACGCCGGCACCATGCAGCTCTCGTTCGAGAACCCGATTCTCGACGAGCAGAAGTACAGCATCGACGAGTGCAAGGAGCGCGGTAAGACCTACTCGGCACCGCTCTACGTCGAGGCAGCCTTCTACAACACCGAGACGCAGGTGCTGAAGAGCCAGACGGTCTACATGGGCGACTTCCCCATCATGACCGACAAGGGCACCTTCATCATCAACGGCACCGAGCGCGTCATCGTCTCGCAGCTCGTGCGCAGCCCCGGCGTGTACTTCGAGCGCGCGCAGGAGAAGACCTCCGACAAGGACGTCTTCACCGCTCGCGTGATCCCCAGCCGCGGCGCCTGGCTCGAGTTCGAGGTCGACAAGCGCGATCAGGTCGGTGTGCGCATCGACCGCAAGCGCAAGCAGTCGGTCACCGTCTTCCTGAAGGCCCTGGGCATGACCAGCGCCGAGATCCTCGAGGAGTTCGCCGGCTACGAGTCGATCGCGCTCACCCTCGAGAAGGACGGCATCGAGACGCAGGAAGAGGCCCTCAAGGACATCTACCGCAAGCAGCGTCCGGGCGAGCAGGTGGCCATCGAGGCCGCCCGCGCCCTGCTCGACAACAGCTACTTCAACCCGAAGCGCTACGACCTCGCCAAGGTGGGTCGCTACAAGATCAACCGCAAGCTCGGCATCGACGCGCCGATCACCGATTCGGTGCTGTCGCTCGAGGACATCGTCGCGACCATCAAGTACCTGGTCGGCCTGCACGCGGGCACCGAGACTCTGCCGGGCGTCCGCGACGGCAAGGCGATCGACGTGCGCCTCGACACCGATGACATCGATCACATCGGCAACCGTCGCATCCGCGCGCTGGGCGAGCTGATCCAGAACCAGGTGCGCACCGGCCTCAGCCGCATGGAGCGCGTGGTGCGCGAGCGCATGACCACGCAGGACATCGAGGCGATCACCCCGAACACCCTGATCAACACCCGCCCCGTGCTGGCGGCGATCAAGGAGTTCTTCGGCACCTCGCAGCTGTCGCAGTTCATGGATCAGAACAACCCGCTCGCGGGCCTGACCAACAAGCGCCGCCTCTCGGCCCTCGGCCCCGGCGGCCTCTCCCGCGACCGCGCGGGCGTCGAGGTGCGCGACGTGCACCCCTCGCACTACGGCCGCATGTGCCCCATCGAGACCCCTGAAGGCCCGAACATCGGTCTGATCGGTGCGCTCGCGACCTTCGCGCGGATCAACGCGTTCGGCTTCATCGAGACGCCGTACCGCCGCATCGTCGACGGCAAGGTGACGGATCAGGTCGACTACCTGACCGCGCACGAGGAGGATGAGTTCCTCATCGCCCAGGCCGGCGCCCCGCTGACCAAGGACGGCAAGTTCGCCGAGAAGCAGGTCCTCGCACGCCCCCGCGGCTCCGAGGTGCAGCTGGTCGACGCGGGCAACGTGCAGTACATGGACGTGTCGCCGCGCCAGATGGTGTCGGTCGCGACCTCGCTGATCCCGTTCCTCGAGCACGACGACGCGAACCGCGCCCTCATGGGTGCGAACATGCAGCGCCAGGCGGTTCCGCTGGTGCGCAGCGAGTCGCCCGTGGTCGGCACCGGCATGGAGGGCTACGCGGCCATCGACGCCGGTGACGTGGTCGTCGCCGAGAAGGCCGGCGTGGTCGCCGACGTCTCGGCCGACGTGGTCACGCTGCAGCTCGACGAGGGCGGCACGCAGAGCTACTACATGCGCAAGTTCGATCGCTCGAACCAGGGCACCAACTACAACCACCGCGTGATCGTCAAGGCCGGCGAGCGGGTCGAGGCCGGCGAGGTCATCGCCGACGGCCCCGCCACCGAGAACGGCGAGCTCGCGCTCGGCAAGAACCTGCTGGTCGCCTTCATGTCGTGGGAGGGCCACAACTTCGAGGACGCCATCATCCTGAGCCAGAACCTGGTGAAGGACGACACGCTCTCGTCGATCCACATCGAGGAGTACGACGTCGACGCCCGCGACACCAAGCTGGGCAAGGAGGAGATCACCCGCGACCTCCCCAACGCCAGCATGGAGGCGCTGAAGGATCTCGACGAGCGCGGCATCATCCGCATCGGCGCCGAGGTCAACCCCGGCGACATCCTGGTGGGCAAGGTCACGCCGAAGGGCGAGACCGAGCTCTCGGCCGAGGAGCGCCTGCTCCGCGCCATCTTCAACGAGAAGAGCCGTGAGGTGCGCGACACCTCCCTGAAGGTGCCGCACGGCGTCTCGGGCACGGTCACCTCGGTGAAGGTGTTCGATGCAGAGAACGACAACGACGACGAGCTCGGCTCGGGCGTCAACCAGCGCGTCGTGGTGTACATCGCCCAGAAGCGCAAGATCACCGAGGGCGACAAGCTCGCCGGCCGCCACGGCAACAAGGGCGTCATCTCGAAGATCCTGCCGGTCGAGGACATGCCGTTCCTCGCCGACGGCACCCCGGTCGACGTCATCCTCAACCCGCTCGGCATCCCCGGCCGCATGAACTTCGGCCAGGTGCTCGAGGTTCACCTCGGCTGGATCGCCAAGTAG
PROTEIN sequence
Length: 932
LAAARNASTNSPKNGRNHSRLSFAKISDTLTVPNLLALQLESFDWLVGNDAWKERVVQAQKDGRDDIALKSGLEEIFDEISPIEDNAGTMQLSFENPILDEQKYSIDECKERGKTYSAPLYVEAAFYNTETQVLKSQTVYMGDFPIMTDKGTFIINGTERVIVSQLVRSPGVYFERAQEKTSDKDVFTARVIPSRGAWLEFEVDKRDQVGVRIDRKRKQSVTVFLKALGMTSAEILEEFAGYESIALTLEKDGIETQEEALKDIYRKQRPGEQVAIEAARALLDNSYFNPKRYDLAKVGRYKINRKLGIDAPITDSVLSLEDIVATIKYLVGLHAGTETLPGVRDGKAIDVRLDTDDIDHIGNRRIRALGELIQNQVRTGLSRMERVVRERMTTQDIEAITPNTLINTRPVLAAIKEFFGTSQLSQFMDQNNPLAGLTNKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCPIETPEGPNIGLIGALATFARINAFGFIETPYRRIVDGKVTDQVDYLTAHEEDEFLIAQAGAPLTKDGKFAEKQVLARPRGSEVQLVDAGNVQYMDVSPRQMVSVATSLIPFLEHDDANRALMGANMQRQAVPLVRSESPVVGTGMEGYAAIDAGDVVVAEKAGVVADVSADVVTLQLDEGGTQSYYMRKFDRSNQGTNYNHRVIVKAGERVEAGEVIADGPATENGELALGKNLLVAFMSWEGHNFEDAIILSQNLVKDDTLSSIHIEEYDVDARDTKLGKEEITRDLPNASMEALKDLDERGIIRIGAEVNPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGVSGTVTSVKVFDAENDNDDELGSGVNQRVVVYIAQKRKITEGDKLAGRHGNKGVISKILPVEDMPFLADGTPVDVILNPLGIPGRMNFGQVLEVHLGWIAK*