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SCN18_14_9_16_R4_B_scaffold_4487_6

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(3056..3631)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003C7F5D4 related cluster n=1 Tax=unknown RepID=UPI0003C7F5D4 similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 181.0
  • Bit_score: 128
  • Evalue 4.50e-27
Uncharacterized protein {ECO:0000313|EMBL:KHL15237.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 176.0
  • Bit_score: 130
  • Evalue 2.20e-27
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 194.0
  • Bit_score: 122
  • Evalue 7.00e-26

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Taxonomy

CN-SCN_Microbacterium_27x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
TTGGAAGAGCTAGAGGACAGCGTGCTTTTGGCGGAGCTCGTCGCGGGCAGCGAAGTGGCGCTCGCGACCATCTACGAGCGCCATCGGCGACCCGTCTACGCCCAGGGATATGTGGAGGTCGGCACGCGCGTCGATGCCGAGGAGGTGCTCCAAGACACGTTTCTCACCCTGTGGCAGAAGCGTCGCGGCATCCGATTGGTCGATGGGTCCATGCTGCCGTGGCTACTGGTGACGGCGAAGAATCATTCGCGCAACCGGCGCCGCTATCAGGCACGCCGGGCGTCGTCGCAGTTGCCCGACGATCCCATGGATCGCGACGCGGATCCCGCGAGTCTCGCCGAACAGCACGAGCTCGCCGACCTGCTCGCCGAAGCGTTGGAGGCGTTGAGTCCTCTGGATCAGCAGATCGTGCAGTTGTGCCTCATCGAGGGGCTCAGCTACCAGCACGTGGCGCTCCACCTGCGGTCGACGCATGCGACCGTCCGGAACCGGCTCAGCCGAGCGAGAAAACTGCTCAGGCTGCGCCTGGAGGCAGAAGTTGAGAGGGGCAGACATGAGCATCGAACCGACTCCTGA
PROTEIN sequence
Length: 192
LEELEDSVLLAELVAGSEVALATIYERHRRPVYAQGYVEVGTRVDAEEVLQDTFLTLWQKRRGIRLVDGSMLPWLLVTAKNHSRNRRRYQARRASSQLPDDPMDRDADPASLAEQHELADLLAEALEALSPLDQQIVQLCLIEGLSYQHVALHLRSTHATVRNRLSRARKLLRLRLEAEVERGRHEHRTDS*