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SCN18_14_9_16_R4_B_scaffold_4554_5

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3457..3801

Top 3 Functional Annotations

Value Algorithm Source
TetR DNA-binding transcription regulator n=1 Tax=Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) RepID=G0HGW6_CORVD similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 121.0
  • Bit_score: 155
  • Evalue 2.10e-35
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 121.0
  • Bit_score: 155
  • Evalue 5.90e-36
TetR DNA-binding transcription regulator {ECO:0000313|EMBL:AEK37954.1}; TaxID=858619 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131); (Corynebacterium mooreparkense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 121.0
  • Bit_score: 155
  • Evalue 2.90e-35

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGCGTGAGGGCATCCTGCGCCTGGGCAATGCGCAGCTCGCCGAGGTCGGCGCAGCCGCCCTCTCCGTGCGAGAGATCGCCCGCGGGCTCGGCGTCTCCTCCTCTGCCATCTACCGCCACATCGCGAGTCGGGACGAGTTGCTGACCATCCTGCTCGTGGACACCTATACCGACCTCGCGGATGCGGCGCTCGCCGACCAGAGTGACTCGCGGGGTCCGGCGGAGAGCCTCGGGGCACTCGCACGCGGAATGCGCGGATGGGCGGTGCGGAACCCCGCGCGCTGGGCGCTGGCCTACGGTTCTCCCGTGCCCGGGTACTCCGCGCCGGCCGAGCAGACGACCGGG
PROTEIN sequence
Length: 115
MREGILRLGNAQLAEVGAAALSVREIARGLGVSSSAIYRHIASRDELLTILLVDTYTDLADAALADQSDSRGPAESLGALARGMRGWAVRNPARWALAYGSPVPGYSAPAEQTTG