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SCN18_14_9_16_R4_B_scaffold_4555_4

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 3323..3802

Top 3 Functional Annotations

Value Algorithm Source
ribosome recycling factor n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037A4675 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 160.0
  • Bit_score: 275
  • Evalue 1.90e-71
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 160.0
  • Bit_score: 278
  • Evalue 3.20e-72
ribosome-recycling factor similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 160.0
  • Bit_score: 239
  • Evalue 5.60e-61

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Taxonomy

SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
GTGATCGACGAGGTTTTCGCCGAGGCGAAGGATCGCATGACCAAGGCGGTCGACGCCGCGAAGGAGGGCTTCGCCACGGTGCGCACCGGCCGCGCGAACCCGTCGCTGCTGCAGAACGTGCAGGTTGACTATTACGGCACCCCGACGCCACTGCCGCAGCTCGCCTCGGTGGCCAACCAGGATGCGCGCAGCCTGGTCATCACCCCCTACGACAAGGGAGCGATGAAGGACATCGAGCAGGCCATCCGCGACATGCCGAACCTGGGTGCCAACCCCTCGAACGACGGCAATGTGATCCGCGTCACGCTGCCCGAGCTCACCGAGGAGCGCCGCAAGGAGTTCGTCAAGATCGTGAAGGGTCGTGCGGAGGACGGCCGCGTCGCGGTCCGCAACGTGCGTCGTCACGTGAAGGATCAGCTCGACGCGCTGAAGAGCGAGGTCGGTGAAGACGAGGTCGCCCGTGCCGAGAAGGAGCTCGAG
PROTEIN sequence
Length: 160
VIDEVFAEAKDRMTKAVDAAKEGFATVRTGRANPSLLQNVQVDYYGTPTPLPQLASVANQDARSLVITPYDKGAMKDIEQAIRDMPNLGANPSNDGNVIRVTLPELTEERRKEFVKIVKGRAEDGRVAVRNVRRHVKDQLDALKSEVGEDEVARAEKELE