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SCN18_14_9_16_R4_B_scaffold_5072_4

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2427..3332

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate binding component n=1 Tax=Arthrobacter sp. Rue61a RepID=J7LYR5_9MICC similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 298.0
  • Bit_score: 311
  • Evalue 5.90e-82
Periplasmic glycine betaine/choline-binding (Lipo)protein {ECO:0000313|EMBL:KFJ03810.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 300.0
  • Bit_score: 335
  • Evalue 5.40e-89
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 298.0
  • Bit_score: 311
  • Evalue 1.70e-82

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Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCGCAAGAAAGCCATCTTCGCCGCGATCGCCGCAACCGCCGCGCTCGCTCTCACCGCCTGCTCGGGCGGTGACCCGTTGAGCTCGGGCAACGGCTCGAAGGACTCGAGCACGATCATCGTCGGATCGGCCGACTTCTCGGAGAGCCAGCTGCTCGCCACTATCTACTCGCACGCGCTGCAGAACGCGGGCGTGAAGGTGGAGGAGAAGCTGAACATCGGCAGCCGGGAGGTGTATCTGCAGGCGCTGCGTGACGGATCGATCAACCTGCTCCCCGAGTACAACGGCTACTTGCTGGGCGAGCTCGACCCCAAGACCAGCGAGACCGACCGAGCCGCGATCCAGCAGCAGCTTCAGGACAAGCTGAACCCCGAGGGTATCGAGGTGCTCGATGCGGCCGAGGCAGAGAACACCGATGTGCTGGTGGTGAATGGGGATGTCGCGAAGAAGCACAACCTCGTCAACATCTCGGATCTGCAGCCCGTCGCGGACCAGCTGGTGCTCGCCGGCCCGGCCGAGTGGAAGACCCGTCAGATCGGTCTGCCCGGCCTCGAACAGGTCTACGGCTTGAAGTTCAAGGAGTTCAAGGTGCTCGATGCGGGCGGACCGCTCACGCTCTCCGCGCTGCAGAACGGTCAGGCTCAGGTCGGCGATATGTTCAGTTCCGATCCCGCGATCGGTGAGAACGGCCTGGTCAGCCTGGTCGATGACAAGGGCCTGTTCCTGCCCGCCAACGTGATCCCCGTGATTCGCAAGGATGCGGCGAGCGACGAGGTGAAGAAGGTGCTCAACGGGATCTCCGCAGCATTGACCACCGCGGACCTGATGGACATGAACGGTCGCATCGCGGCGGGCGACGACATCGGCGCCATCGCCGACGACTGGCTGGCGAAGCACAAGCAGTAG
PROTEIN sequence
Length: 302
MRKKAIFAAIAATAALALTACSGGDPLSSGNGSKDSSTIIVGSADFSESQLLATIYSHALQNAGVKVEEKLNIGSREVYLQALRDGSINLLPEYNGYLLGELDPKTSETDRAAIQQQLQDKLNPEGIEVLDAAEAENTDVLVVNGDVAKKHNLVNISDLQPVADQLVLAGPAEWKTRQIGLPGLEQVYGLKFKEFKVLDAGGPLTLSALQNGQAQVGDMFSSDPAIGENGLVSLVDDKGLFLPANVIPVIRKDAASDEVKKVLNGISAALTTADLMDMNGRIAAGDDIGAIADDWLAKHKQ*