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SCN18_14_9_16_R4_B_scaffold_8553_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(281..1921)

Top 3 Functional Annotations

Value Algorithm Source
lysine decarboxylase n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629EF7 similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 546.0
  • Bit_score: 954
  • Evalue 3.20e-275
Ornithine decarboxylase {ECO:0000313|EMBL:EYT55255.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 549.0
  • Bit_score: 946
  • Evalue 1.20e-272
ornithine decarboxylase similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 554.0
  • Bit_score: 652
  • Evalue 9.50e-185

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Taxonomy

SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52 → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
GGCCTCGTCTCTCTGCTCGCCCCGGTGCGCACGCTGAAGAAGGCGCAGGAGCTGGCGGCACGCGCGTTCGGCGCCAAGCACACCTTCTTCGTGACCAGCGGCACCTCCACCGCCAACAAGATCGTGCATCAGGCGCTCGTCTCGCCCAACGAGGTGGTGCTGGTGGATCGCAACTGCCACAAGTCGCACCACCACGCCATCATGCTGACCGGCGCGCGCCCGGCGTACCTCGAGGCCTACCCGCTGAACGACTTCGCCTTCTACGGCGCGGTGCCGCTGAACCGGATCAAGCAGCTGCTGCTCGACTACCGCGCAGCCGGCCGGCTCGATGAGGTGCGGATGCTCACGCTGACCAATTGCACCTTCGACGGCATCGTCTACGATCCCGAGCGCGTGATGGCCGAATGCCTCGCGATCAAGCCCGACCTGGTGTTCCTGTGGGACGAGGCCTGGTTCGCCTTCGCCGCGTTCCACCCGGTGACCCGTCGCCGCACGGCGATGGCCGCGGCGAAGCGGCTCGAGGAGCGGTTGCGGACGGCGGCGCACGACGCGGCCTACCGAGAGCAGCAGCAGCGCCTGTTCGACGCCGACGGCAACCCGGCGGCCGACGAGGCGTGGCTGGAGGAGCGTTTGATCCCCTCCCCCGAAGCACGGTTGCGGGTCTACGCGACGCAGTCCACGCACAAGACCCTCACCTCGCTGCGGCAGGGATCGATGATCCACGTCTACGACCAGGACTGGGTGCGCGAGGCCGAGGAGCCGTTCCACGAGGCCTACATGACGCACACCACCACCTCGCCCAACTACCAGATCCTCACCTCGCTCGATCTGGGTCGTCGTCAGGTGGAGCTCGAGGGCTTCGAACTGGTGCAGCGCCAGCTCGACCTGGCCACCAGCCTGGCCCAGGCGATCGCCAGGCATCCGCTGCTGCGCCGCACCTTCCGGGTGCTCACGGCGCACGATCTGATCCCCGCGGAGCACCGCGCCACCGGGCGGCCGATGCCGCTGCGCGACGGCCTCTCGCCGATGTGGCAGGCGTGGGTGCAGGACGAGTTCGTGATCGACCCCTCGCGCGTCACCATCGAGATCAGTCGCACCGGGGTGGACGGCGACACGTTCAAGCACGACTATCTGATGGATCGCTACGGGGTGCAGGTCAACAAGACCAGTCGCAACACCGTGCTGTTCATGACGAACATCGGCACCTCGCGCAGCGCCATCGCCTATCTGATCGAGGTGCTGGTGAAACTCGCGGAGCGGTTCGAGGAGGATCGGGCGCAGCAAGATCCGGATCTCCCCCGACCCGACGAGGCGACCATGCCTCCGTTGCCCGATTTCAGCTCGTTCTCCGAGACATATGCCACCGACGGCATCAGACCGGATGGGGATATGCGCGCCGCGTTCTTCAGGGGGCAGCGCCGCGCATCGGTGGAGCACCTGCAACCGGTGGAACTGCGCGAACGGGTGGAGCGCGGCGAGCAGCCGGTGAGCGCCGGCTTCGTGACGCCCTATCCTCCCGGCTTCCCGGTGCTGGTGCCCGGCCAGGTGATCACCGCCGAGGTGCTCGATTTCATGGCCGTGCTCGACACGCGCGAGATCCATGGCTACGACCCGGCGAAGGGGTATCGCGTTCTGCGCTGA
PROTEIN sequence
Length: 547
GLVSLLAPVRTLKKAQELAARAFGAKHTFFVTSGTSTANKIVHQALVSPNEVVLVDRNCHKSHHHAIMLTGARPAYLEAYPLNDFAFYGAVPLNRIKQLLLDYRAAGRLDEVRMLTLTNCTFDGIVYDPERVMAECLAIKPDLVFLWDEAWFAFAAFHPVTRRRTAMAAAKRLEERLRTAAHDAAYREQQQRLFDADGNPAADEAWLEERLIPSPEARLRVYATQSTHKTLTSLRQGSMIHVYDQDWVREAEEPFHEAYMTHTTTSPNYQILTSLDLGRRQVELEGFELVQRQLDLATSLAQAIARHPLLRRTFRVLTAHDLIPAEHRATGRPMPLRDGLSPMWQAWVQDEFVIDPSRVTIEISRTGVDGDTFKHDYLMDRYGVQVNKTSRNTVLFMTNIGTSRSAIAYLIEVLVKLAERFEEDRAQQDPDLPRPDEATMPPLPDFSSFSETYATDGIRPDGDMRAAFFRGQRRASVEHLQPVELRERVERGEQPVSAGFVTPYPPGFPVLVPGQVITAEVLDFMAVLDTREIHGYDPAKGYRVLR*