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SCN18_14_9_16_R4_B_scaffold_12206_1

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2..805

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 262.0
  • Bit_score: 462
  • Evalue 3.40e-127
2-isopropylmalate synthase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQ41_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 262.0
  • Bit_score: 462
  • Evalue 2.40e-127
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 258.0
  • Bit_score: 454
  • Evalue 1.40e-125

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Taxonomy

SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
GAGCCCGACTTCGCGCTCGAGGTGTGCGACGCGATGACCGAACTGTGGGACGCGAGCCCGCAGCGACCCGTGATCCTCAATCTGCCCGCCACCGTGGAGGTCGCCACGCCCAACGTCTACGCGGACCAGATCGAATACATGCACCGCAACCTGGCGCGACGGGACGGCGTGATCCTCTCGGTGCACCCGCACAACGACCGGGGAACCGGCATCGCCTGCGCCGAGCTCGCCGTTCTCGCCGGCGCCCAGCGGGTCGAGGGCTGCATCTTCGGCAACGGCGAGCGGACCGGGAACGTCGACATCGCCACGCTCGCGTTGAACCTGCACGCGCAGGGCGTCGACCCGATGATCGATTTCTCGCACATCGACGAGATCCGACGCACGGTCGAGTACTGCACACGCATCGAGGTGCATCCCAGGCACCCCTACGTCGGCAGTCTGGTACACACGGCATTCAGCGGCACGCATCAGGATGCGATCAAGAAGGGCTTCGCCGAGCACCGCCTGCGTGCGTCGGAACTGGGCGAGGACGAATCCGCGATCGACTGGCGGGTGCCCTACCTGCCGATCGACCCGGCGGATATCGGGCGCAGCTACGAGGCCGTGATCCGGGTGAACTCGCAGTCGGGCAAGGGCGGCATCGCCTACCTGCTGGAGCAGGAGTTCGGGATCTCACTGCCACGGGAGCAGCAGGTCGAACTCGCCGGGCACGTGCAGGCGCACACCGACGCCTCCGGCGGCGAGGTCACCGCATCCGAGCTGTTGACGATCCTGCGCCGCGAGTTCCCGGAGTACGCCGCCTGA
PROTEIN sequence
Length: 268
EPDFALEVCDAMTELWDASPQRPVILNLPATVEVATPNVYADQIEYMHRNLARRDGVILSVHPHNDRGTGIACAELAVLAGAQRVEGCIFGNGERTGNVDIATLALNLHAQGVDPMIDFSHIDEIRRTVEYCTRIEVHPRHPYVGSLVHTAFSGTHQDAIKKGFAEHRLRASELGEDESAIDWRVPYLPIDPADIGRSYEAVIRVNSQSGKGGIAYLLEQEFGISLPREQQVELAGHVQAHTDASGGEVTASELLTILRREFPEYAA*