ggKbase home page

SCN18_14_9_16_R4_B_scaffold_9096_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(344..1330)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 328.0
  • Bit_score: 619
  • Evalue 2.00e-174
DNA-directed RNA polymerase subunit alpha n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629C40 similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 328.0
  • Bit_score: 619
  • Evalue 1.10e-174
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 329.0
  • Bit_score: 558
  • Evalue 6.60e-157

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Leifsonia_139x → CN-SCN_Leifsonia_139x → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 987
GTGCTCATCGCACAGCGACCCACTCTGACTGAAGAATCAATCTCCGAGTACCGCTCGCGCTTCGTTATCGAGCCGCTCGAGCCGGGCTTCGGTTACACCCTCGGTAACTCGCTTCGCCGCACCCTGCTCTCGTCGATCCCCGGCGCCGCCGTCACCAGCGTGCGCTTCGAGGGCGTCGCCCACGAGTTCACCACGATCCCCGGCGTGACCGAGGACGTGACCGAGATCATCCTGAACATCAAGGATCTGGTGGTCTCCAGCGAGCACGACGAGCCGATCACCGCCTACCTGCGCAAGACGGGCGCCGGCGAGGTCACCGCCGCCGACATCTCGGCTCCGGCCGGTGTCGAGGTGCACAACCCCGAGCTGGTCATCGCGACGCTCAGCGACTCCGCTCAGTTCGAGCTCGAGCTGACCATCGAGCGCGGCCGCGGCTACGTCTCGGCCGCTCAGAACCGCAACGACGATGCAGAGGTCGGCCGCATTCCGGTCGACTCGATCTACTCGCCGGTGCTGAAGGTCACCTACCGCGTCGAGGCCACCCGTGCCGGCGAGCGCACCGACTTCGACCGCCTGGTGGTCGACGTCGAGTCGAAGCCCGCCATCACCCCGCGCGACGCCATCGCTTCGGCCGGTTCGACGCTGGTCGAGCTCTTCGGCCTGGCCCGCGAGCTGAACACCGCGGCCGAGGGCGTGGAGATCGGCCCGGCTCCCGCCGAGGTCGTCGCCGACGGCGAGCTGTCGATCCCGATCGAGGATCTCGATCTCTCGGTGCGCAGCTACAACTGCCTGAAGCGCGAAGGCATCAATACGGTGAGCGAGCTCGTTGCGCTCAGCGAGGCCCAGCTGATGAACATCCGCAACTTCGGTCAGAAGTCGGTCTTCGAGGTGCGCGACAAGCTCACCGAGATGGGCCTCTCGCTGAAGGACGCCGTGCCCGGTTTCGACGGTGCGCAGTTCTACAGCTACGAGGACGACGCCAACTAA
PROTEIN sequence
Length: 329
VLIAQRPTLTEESISEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRFEGVAHEFTTIPGVTEDVTEIILNIKDLVVSSEHDEPITAYLRKTGAGEVTAADISAPAGVEVHNPELVIATLSDSAQFELELTIERGRGYVSAAQNRNDDAEVGRIPVDSIYSPVLKVTYRVEATRAGERTDFDRLVVDVESKPAITPRDAIASAGSTLVELFGLARELNTAAEGVEIGPAPAEVVADGELSIPIEDLDLSVRSYNCLKREGINTVSELVALSEAQLMNIRNFGQKSVFEVRDKLTEMGLSLKDAVPGFDGAQFYSYEDDAN*