ggKbase home page

SCN18_14_9_16_R4_B_scaffold_7458_3

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1261..2208)

Top 3 Functional Annotations

Value Algorithm Source
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 311.0
  • Bit_score: 567
  • Evalue 8.80e-159
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29) similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 311.0
  • Bit_score: 453
  • Evalue 4.90e-125
queuine tRNA-ribosyltransferase n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000367EA94 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 311.0
  • Bit_score: 565
  • Evalue 3.10e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 948
TCCGGCGGGTTCCAGGTGATGTCCCTGGGCGTCGGCTTCAAGAAGGTGATCTCGATGACCGAGAGCGCCCACGCCGAGGCGGAGGTGATCGCGAAGAACAAAGAACGCCTGGCGCATGTGGACGAAGACGGTGTGACGTTCAAGTCGTTCATCAACGGCGACAAGCACCGCTTCACGCCCGAGGTCTCGATGCGGATCCAGCATCAGCTGGGCGCGGACATCATCTTCGCCTTCGACGAGTGCACCACGCTGCTGAACACGCGCCCCTACCAGGAGGATTCCGTCGCGCGCACCGAGCGCTGGGCCGTCCGCTGCCTGGACGAGCACGCCAGGCAGACCGCAGAGCGCGGGCATCGCCCGTACCAGGCCCTCTTCGGTGTGGTGCAGGGCGCGCAGTACGAGGATCTGCGCCGTCAGGCCGCGCGCGGGCTGGCGAGCCTGCGCGGATCCGAGGCCACCGAGCAGCAGTTCGACGGTTTCGGCCTCGGCGGCGCGCTCGAGAAGAGCGAGCTCGGCACCATCGTCGGGTGGATGAGCGATGAGCTGCCCGAGTCGAAGCCCCGCCACCTGCTCGGCATCTCGGAACCCGACGACCTCTTCGCCGGCATCGCCGCCGGTGCCGACACCTTCGATTGCGTTGCACCGTCGCGCCAGGCCAGGGGCGGCACCATGTACTCCGAGAACGGACGGATCAATGCGAAGGCTGCAGCGCAGCGCCGACGCTTCGAGCCTCTGGATCCCGAGTGCGATTGCTACACCTGCACCAACTACACCGCCGCCTACCTGCATCACCTGTTCAAAGCGAGCGAGATGCTGGCGTCGACCCTGGCAACGATCCACAACGAGCGCTACATCGTGCGTCTGGTCGAGCGGATCCGGCAGTCGATCATCGACGGCACCTTCGCCGAGTTGCGCGAGCAGACGCTCGGTCGCCTCGGCAAACGCTGA
PROTEIN sequence
Length: 316
SGGFQVMSLGVGFKKVISMTESAHAEAEVIAKNKERLAHVDEDGVTFKSFINGDKHRFTPEVSMRIQHQLGADIIFAFDECTTLLNTRPYQEDSVARTERWAVRCLDEHARQTAERGHRPYQALFGVVQGAQYEDLRRQAARGLASLRGSEATEQQFDGFGLGGALEKSELGTIVGWMSDELPESKPRHLLGISEPDDLFAGIAAGADTFDCVAPSRQARGGTMYSENGRINAKAAAQRRRFEPLDPECDCYTCTNYTAAYLHHLFKASEMLASTLATIHNERYIVRLVERIRQSIIDGTFAELREQTLGRLGKR*