ggKbase home page

SCN18_14_9_16_R4_B_scaffold_6676_3

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1322..2485)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E0C6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 381.0
  • Bit_score: 404
  • Evalue 1.10e-109
Inner membrane symporter YicJ {ECO:0000313|EMBL:KJL25772.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 383.0
  • Bit_score: 544
  • Evalue 7.50e-152
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 384.0
  • Bit_score: 379
  • Evalue 6.50e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
TGGGACTTCATCCTGAACCCCATCGCCGGTCGGGTCAGCGACCGATCCCGGCACCCGCGCGATCGCCGCAGGCACTTCGTGATCCGCGCGGGCTCCTTGCTCGCCGTCATCTTCGTCGTGATCTTCGTCGGACCGACGCAGCCGCCGCTGCTCGCGGGGCTCTGGGTGCTGCTGGTCTCGCTCGCCTGCGCCACCGTCTACGCGTTCTTCCAGGTGCCCTTCCTCTCGATGGCCGCCGAGCTCACCGACGACTACACGGAGCGCACCCGCTTGACCACCTGGCGGGTCGCGGTCTTCAGCCTCGCGATCTTGGTCTCCGGGGCCGTCGCGCCGCTGCTCGTCGAGGCCGGAGGCGGCATCATCGGCTACCGGATCATGGCCGCGGCCATGGGCGTGCTCATCCTCTGCGGCGCGGTCGGCCTGTGGTTCGGCACCCGGGGCGTGCCGCTGACCCGGGATGAGCAGGCGAGCGGTCGGCTGATCGAGCAGCTCTCGATCGTGCTGCGTGATCGGGACATCCGGCGGCTGGTCGCCGCGTTCGTGCTGCAGGCAGTGGCCATCGGCATGGTGCTGAGCGGAGTCGTCTACGTCGCCCGTCACGTGGTGGGGGATCCCGGCGTCTCCACCTACGCCTTCGTGTGCTTCGTCGGGCCGGCCGTACTGTTCGCACCGCTCTGGTCGCGCATCGGCGTACGACTCGGCAAGAAGCGCGGCTTCGCCATCGCCACCGTCATCATGGGGGCGGGCCTGCTCGGTCTGCTGGCCACGCGCACCGGCGAGCCCACGCTGCTGCTCGCCGCTGCCGCAGTCGTGGGTATCGGGTATGCGGGAGCGCAGATCTTCCCGCTGGCGATGCTGCCCGATGTCGCGGCAGAGGATGCCAAGCGCTCGGGGGTGAACCGGATCGGCATGATCTCGGGGCTCTGGTCGGGATTCGAGCTGCTGGGGCTGGCGCTGGGCCCGGCGCTGCTCGGAGTCATCCTCTGGCTCGGCGGATACGCCGAGGCTGCCGGAGAAGCGGTGAGTCAGAGCGGTGCAGCGCGGTGGGCGATCGTGATCGGCGTCTCCGCGGTGCCGGCGCTGCTGTGCTTCGCGAGCCTGCTGCCGCTCTGTCGATACCGGCTGGACGGGCGACTGCGCGGGGCGGCAGTGCTCACCAAGTGA
PROTEIN sequence
Length: 388
WDFILNPIAGRVSDRSRHPRDRRRHFVIRAGSLLAVIFVVIFVGPTQPPLLAGLWVLLVSLACATVYAFFQVPFLSMAAELTDDYTERTRLTTWRVAVFSLAILVSGAVAPLLVEAGGGIIGYRIMAAAMGVLILCGAVGLWFGTRGVPLTRDEQASGRLIEQLSIVLRDRDIRRLVAAFVLQAVAIGMVLSGVVYVARHVVGDPGVSTYAFVCFVGPAVLFAPLWSRIGVRLGKKRGFAIATVIMGAGLLGLLATRTGEPTLLLAAAAVVGIGYAGAQIFPLAMLPDVAAEDAKRSGVNRIGMISGLWSGFELLGLALGPALLGVILWLGGYAEAAGEAVSQSGAARWAIVIGVSAVPALLCFASLLPLCRYRLDGRLRGAAVLTK*