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SCN18_14_9_16_R4_B_scaffold_13876_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(697..1200)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D64443 related cluster n=1 Tax=unknown RepID=UPI0003D64443 similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 179
  • Evalue 2.00e-42
DeoR family transcriptional regulator {ECO:0000313|EMBL:ETI82794.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 179
  • Evalue 2.70e-42
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 160.0
  • Bit_score: 157
  • Evalue 2.20e-36

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Taxonomy

Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
TGTGCCGCCTCGCTGGTGCCGGATCGTGCGGTCGTGATCCTCGATATCGGCACCAGTTGCGCTGCGGTCGCCAGGCATCTGCGGGGCCGTGAGGTCACGGTGGTGACCGCCTCGCTCGCCGTGGTCGATGAACTGCGCGACGACCGCAGCATCGAACTCGTGGTGCTCGGCGGACTGCTGCGCCCCTCGTATCTCTCGCTGGTCGGCTCCATCACGCTCGATGTGATCAGCCGACTCAGTGCCGATATCTCGTTCATCGGCACCTCGGGTGTGCGTGCGGATGGCACGGTGCTCGATTCGACCGGTACCGAGGTGCCCATCAAACACGCGATCATGGAGCGTTCGGAGCGGCGCTGCCTGGTGGCGAGCGCCGACAAGTTCCCGGGGTCCGGGCTGCTTCCGGTGTGCGAGGTGGGCGATTTCAGCGACGTGGTGACGACCGCGCCTCGGGGGACTGCGCCGTTCGATGGTTTCGCCGATCGCATCGATGTGCGGTTCGTCTGA
PROTEIN sequence
Length: 168
CAASLVPDRAVVILDIGTSCAAVARHLRGREVTVVTASLAVVDELRDDRSIELVVLGGLLRPSYLSLVGSITLDVISRLSADISFIGTSGVRADGTVLDSTGTEVPIKHAIMERSERRCLVASADKFPGSGLLPVCEVGDFSDVVTTAPRGTAPFDGFADRIDVRFV*