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SCN18_14_9_16_R4_B_scaffold_12801_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(314..1297)

Top 3 Functional Annotations

Value Algorithm Source
amino acid permease n=1 Tax=Rhodococcus opacus RepID=UPI00029CB320 similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 306.0
  • Bit_score: 389
  • Evalue 1.90e-105
Amino acid permease {ECO:0000313|EMBL:AII09399.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 313.0
  • Bit_score: 392
  • Evalue 4.00e-106
putative transporter similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 306.0
  • Bit_score: 389
  • Evalue 5.30e-106

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Taxonomy

SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9 → SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9 → SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 984
GTGCAGCCCCTCAGCATCGCCGACTTCAACCCCACCCTCGGCGGCCTGCTCGGTCTCGCTCCGCTGCTGCTCTTCGCCTATCTGGGCTTCGAGGCGACCAACAGCGCCTCCGATGAGATGAAGAACCCCAAGCACGACATCCCGGTGGCCATCGCGCGCTCGGGCCTGGTCTCGGCGCTCTGCTACACGCTGCCGATCCTCGCCATGCTGCTGGTGCTGCCCACCAAGACGATCACCGGCATCGGCGGCCTGCTCGACGCGGTGAAGACGGTGTTCACCGTCTACGGTCCGGCCGGCGACGTCCTGGTGCTGCTCGCCGCGATCATGTTCGTGCTGATCCTCGCCTCGCAGGGCGCCGCCTGGATGATCATCAGCGACCGGATGCAGGCGCTGACCGCCGCCGACGGCGCCTTCTTCGGCGGCTTCTTCGGCAGGATCCACAAGGGTCTCGGCACCCCGGTGAACGTGAACCTGCTCTCGGGCACCGTCGCCACGGTCTTCCTGATCGCCGCGATGCTGCTGCTCGGCGGCAGCGGGGACAACCCCACCAGCGACGCCGGGGCGATCTTCAGCGTGGTGCTGAACATCTCGATCTCCACGTTCCTGCTGAGCTACCTGCTCATCATCCCCGCCGCCGTCAAGCTGCGCATGAAGTACCCGAACGTCGAGCGCCCCTTCCGTGCGCCTGTTGGCAACGCCGGCTTCGCCGTGCTCGGCACGATCGCGTTCCTCTGGGTGCTGCTCGGATCCTGGGTCACCATCTTCCCGGGCACGCTCGAGCGGGTCTTCGGCCTCGAGTACGACTTCGTCGACGAGTGGGGCGTGGAGCAGGGTCCGTTCACCCTGCTCACGATCGGCACGCTCGTGGTGCTCGGAGCGCTCGCACTCGTCGGCTATGTCGGCGGCCGCAGAATCCGCGAGGTCAAGCCCAATCTGCACACCGAGGCCCTGATGGTGGGCTTCGAAGAGAACATCGGCAAGTAA
PROTEIN sequence
Length: 328
VQPLSIADFNPTLGGLLGLAPLLLFAYLGFEATNSASDEMKNPKHDIPVAIARSGLVSALCYTLPILAMLLVLPTKTITGIGGLLDAVKTVFTVYGPAGDVLVLLAAIMFVLILASQGAAWMIISDRMQALTAADGAFFGGFFGRIHKGLGTPVNVNLLSGTVATVFLIAAMLLLGGSGDNPTSDAGAIFSVVLNISISTFLLSYLLIIPAAVKLRMKYPNVERPFRAPVGNAGFAVLGTIAFLWVLLGSWVTIFPGTLERVFGLEYDFVDEWGVEQGPFTLLTIGTLVVLGALALVGYVGGRRIREVKPNLHTEALMVGFEENIGK*