ggKbase home page

SCN18_14_9_16_R4_B_scaffold_14598_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 875..1144

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 69.0
  • Bit_score: 106
  • Evalue 1.60e-20
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Leucobacter salsicius RepID=UPI0003478A0C similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 70.0
  • Bit_score: 105
  • Evalue 2.50e-20
1-deoxy-D-xylulose 5-phosphate reductoisomerase similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 70.0
  • Bit_score: 96
  • Evalue 3.30e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGGAGCCATGAGACGCGTCGTGATCCTCGGTTCCACCGGCTCGATCGGCGAGCAGGCGCTCGACGTGATCCGGGCCAATCCCGAACGCTTCGAGGTGGTGGGGCTCGCTGCGGGCACGCAGGCGGCCCGTGTGGCCGAGCAGGCCGACGAGTTCGGTGTGGAGCATACGGCGCTCGGGATCGACGAGGCCACTGCGCTGGTGCGCGAGGTCGAGGGGCTGGAGCACAAGTCGCGCCGGCAGGACGTGCTGGTCGACGACGAGCTGATC
PROTEIN sequence
Length: 90
MGAMRRVVILGSTGSIGEQALDVIRANPERFEVVGLAAGTQAARVAEQADEFGVEHTALGIDEATALVREVEGLEHKSRRQDVLVDDELI