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SCN18_14_9_16_R1_B_scaffold_2333_12

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(9051..9827)

Top 3 Functional Annotations

Value Algorithm Source
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 258.0
  • Bit_score: 497
  • Evalue 9.20e-138
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ90_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 258.0
  • Bit_score: 497
  • Evalue 6.50e-138
hisF; imidazoleglycerol-phosphate synthase cyclase similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 258.0
  • Bit_score: 452
  • Evalue 5.20e-125

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGACTTTGAAAGCGCGCGTCATTCCCTGCCTCGACGTCAAGGACGGCCGCGTCGTCAAGGGCGTCAGCTTCGTCAACCTGATCGATGCCGGCGATCCCGTGGAATCGGCCAAGGCCTATGATGCCGCCGGTGCCGACGAGCTCTGCTTCCTCGACATCACCGCCTCTTCCGACAACCGCGACACGATCTTCGACGTCGTGGCGCGCACGGCGGCCCATTGCTTCATGCCGCTCACCGTCGGCGGGGGCGTGCGCACGGTCGCCGACATCCGCAAGCTGCTGCTCGCCGGGGCCGACAAGGTGTCGATCAACTCGGCCGCCGTCGCCAACCCGGATTTCGTCGCGGAAGCCGCCGACAAGTTCGGCAACCAGTGCATCGTCGTCTCGATCGATTCCAAGAAGGTTTCGGCGGAAGGCGAAGAGGACCGCTGGGAAATCTTCACCCATGGCGGGCGCAAGCCGACCGGCATCGACGCCGTCGCCTTCGCCGAGAAGATGGTGGAGCGCGGCGCGGGCGAGCTGCTGCTCACCTCCATGGACCGCGACGGCCAGAAGGGCGGCTACGACATCGCGCTGACCCGTACGATCGCCGACCGTGTCCCGGTACCGGTCATCGCGTCCGGCGGCGTCGGCACGCTCGACCATCTCGTCGAGGGCGTGCGCGACGGCCATGCGACGGCAGTGCTGGCCGCCTCGATCTTCCACTTCGGCACCTACACGGTGGGCGAGGCCAAGCGCTACATGGCCGACCATGGCATCGCCATGCGGCTCGACTGA
PROTEIN sequence
Length: 259
MTLKARVIPCLDVKDGRVVKGVSFVNLIDAGDPVESAKAYDAAGADELCFLDITASSDNRDTIFDVVARTAAHCFMPLTVGGGVRTVADIRKLLLAGADKVSINSAAVANPDFVAEAADKFGNQCIVVSIDSKKVSAEGEEDRWEIFTHGGRKPTGIDAVAFAEKMVERGAGELLLTSMDRDGQKGGYDIALTRTIADRVPVPVIASGGVGTLDHLVEGVRDGHATAVLAASIFHFGTYTVGEAKRYMADHGIAMRLD*