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SCN18_14_9_16_R1_B_scaffold_2333_14

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(10236..10484)

Top 3 Functional Annotations

Value Algorithm Source
hisA; 1-(5-phosphoribosyl)-5-[(5phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase (EC:5.3.1.16) similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 66.0
  • Bit_score: 124
  • Evalue 7.90e-27
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 66.0
  • Bit_score: 124
  • Evalue 3.90e-26
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV00_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 66.0
  • Bit_score: 124
  • Evalue 2.80e-26

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGATCCTCTTTCCCGCCATCGACCTGAAAGACGGCCAGTGCGTGCGCCTCAAGCTCGGCGACATGGACCAGGCCACCGTCTACAATCCCGACCCAGCCGCGCAGGCGAAAGCCTTCGAGGACCAGGGCTTCGAATGGCTGCATGTCGTCGACCTCAACGGCGCCTTCGCGGGGGGCGCATATCGAACGCTGGCTGTCGCGCGGCCTCTCGCGCGTCATCCTCGGCACCGTCGCCGTGCGCGATCCTGA
PROTEIN sequence
Length: 83
MILFPAIDLKDGQCVRLKLGDMDQATVYNPDPAAQAKAFEDQGFEWLHVVDLNGAFAGGAYRTLAVARPLARHPRHRRRARS*