ggKbase home page

SCN18_14_9_16_R1_B_scaffold_2036_2

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 1192..1665

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J1SU14_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 150.0
  • Bit_score: 263
  • Evalue 7.40e-68
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 155.0
  • Bit_score: 263
  • Evalue 3.60e-68
Transcriptional regulator {ECO:0000313|EMBL:EJJ28753.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 150.0
  • Bit_score: 263
  • Evalue 1.00e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGACCCCGCCGCGCCTCGATGCCTTCGACAGGAAGATCCTCGCCATCCTGCAGAAGGACAACACGACGCCGCAGCGCGCCATCGGCGAAGCGGTCAACCTCTCCGCGCCCGCCGTGCAGCGGCGCATAAGGCGCATGACGGAGGAGGGCGTCATCCGGGCGAACGTCGCCGTCGTCGATCCCGTCGCGGTCGGCCAGTCCATCACCATCTTCGTCGAGGTGGAGGTGATCAGCGAGACGGCCGAGCACATCGAGGCGGCCAAGCGCGCCTTCGAGGCATCGCCGGAAATCCAGCAATGCTACTACGTCACCGGCGAGGCCGACTTCATCCTCGTCGTGGTGGTGCCGGCCATGGCCGACTACGAGGCGCTGACCCGCCGCCTCTTCTTCGGCAACAACAATGTCAAGCGCTTCCGCACCTTCGTCGCCATGGACCGGGTGAAGGCCGGGCTCGCCGTGCCGGTCGGCGACTGA
PROTEIN sequence
Length: 158
MTPPRLDAFDRKILAILQKDNTTPQRAIGEAVNLSAPAVQRRIRRMTEEGVIRANVAVVDPVAVGQSITIFVEVEVISETAEHIEAAKRAFEASPEIQQCYYVTGEADFILVVVVPAMADYEALTRRLFFGNNNVKRFRTFVAMDRVKAGLAVPVGD*