ggKbase home page

SCN18_14_9_16_R1_B_scaffold_2036_5

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(3506..4477)

Top 3 Functional Annotations

Value Algorithm Source
Putative amino-acid transport system permease ABC transporter protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQD5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 323.0
  • Bit_score: 570
  • Evalue 5.80e-160
Putative amino-acid transport system permease ABC transporter protein {ECO:0000313|EMBL:EYR82685.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 323.0
  • Bit_score: 570
  • Evalue 8.20e-160
putative amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 323.0
  • Bit_score: 565
  • Evalue 5.30e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGATCGGTCGGCTGATACTCACCTATCCCGAGGCGGCGCGCCGGGTCGGGAGCCTGCTCGTCCTCGCCGTCGTCGTGGCGGCGCTCTATTCCATGGGCATCAGCTCGGCCTGGATCGGCCATCTCCTGCCGTCCTCGCTGGACTGGCTGGCGGCCAACCCCACCGCGGGCCGGCTGGTCTCGGCGCTGCTCATCGCGCTAATCCTGGCGGCCAACTGGAAGGCGCTGCGCCAGCTCTCGCGGCGCCAGCAGGTCGTCGCCGTCTGGCTGGAGCTGTTCGTGCTCCTGATGATGTTCTTCTATTCCTTCGACCTCTCCTTCACCTTCATCGCCAAGAAGATCGGCTTCCTCATCACGCAGGGCGTGACGACGACGCTCTACATCTCCGCCATCTCCATCGTCATCGCCACGGTCATCGCGCTGGCGGGCGCCATCGCCAAGCTGTCGAGCAACGGCGTGATCTACGGCCTTGCGACCTTCTACACCTCGCTCTTCCGCGGCCTGCCGCTGTTGATGCAGATCTACATCATCTATCTCGGCCTGCCGCAGGTCGGCTACGTCATCAGCGCCGTGCCGGCCGGCATCCTCGCGCTGTCGCTGTGCTACGGCGCCTACATGACGGAAATCTTCCGCGCCGGCATCCAGAGCATCAACCGCGGCCAGACGGAGGGCGCGACGGCGCTCGGCCTCAGCCCGAGCCAGACGATGGCGCTCGTCATCCTGCCGCAGGCGATGCGGGTCATCATCCCGCCGACCGGCAACCAGTTCATCGCCATGCTGAAGGATTCCTCGCTCGTCTCCGTCGTCGGCGTCTGGGAGATCATGTATCTCGCCCGCACCCAGGGCCAGACCGAGTTCCGTCATATCGAGATGCTGATCACCGCCTCGATGATCTACTGGATCCTGTCGATCTGCCTGGAATATGCCCAGTCCCGCATCGAGGAACGCTTCGGCCGCTTCAATGCCCGCTGA
PROTEIN sequence
Length: 324
MIGRLILTYPEAARRVGSLLVLAVVVAALYSMGISSAWIGHLLPSSLDWLAANPTAGRLVSALLIALILAANWKALRQLSRRQQVVAVWLELFVLLMMFFYSFDLSFTFIAKKIGFLITQGVTTTLYISAISIVIATVIALAGAIAKLSSNGVIYGLATFYTSLFRGLPLLMQIYIIYLGLPQVGYVISAVPAGILALSLCYGAYMTEIFRAGIQSINRGQTEGATALGLSPSQTMALVILPQAMRVIIPPTGNQFIAMLKDSSLVSVVGVWEIMYLARTQGQTEFRHIEMLITASMIYWILSICLEYAQSRIEERFGRFNAR*