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SCN18_14_9_16_R1_B_scaffold_1598_7

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 6265..7962

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis citrate transducer n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVC4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 565.0
  • Bit_score: 867
  • Evalue 4.00e-249
Methyl-accepting chemotaxis citrate transducer {ECO:0000313|EMBL:EYR82969.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 567.0
  • Bit_score: 920
  • Evalue 9.60e-265
Chemoreceptor of MCP family, unusual structure. Methyl-accepting chemoreceptor similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 568.0
  • Bit_score: 756
  • Evalue 3.70e-216

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGCGCTTCACCATCAAACTCAAGCTGTTCCTGACATTCGGTTTCATGATCGCGGTGCTCGTCGGCACCGCGGGCTACGGCATCATGAGCCTCGGCAGCCTCAACACGACGCTCAGCGACGTGCTGAACGGTCCGGCCGCGCGCCTCAAGCTCGCCCAGCAACTGAGCAACTTCCAGCTCCAGCAGATCCGCCAGCAGAAGAACATGCTCTCTTCCGCCAATGTCACCGAGACCAACCGCTATGTCGGCCTCAGCGACGAAGCGCGCAAGGAATTCGACGCGGCCTTCGAGGAGGTCGTCGCCAAGGCGACCGAGCAGGGCAAGGTGTTGTGGAGCCAGCTTTCCACCTTCACCAGCGATTTCCGCCGCAATGACGACCGCATCCGCGCGCTGGCGCTTGCCGGCGACATGGACGGCGCGACGCGCCTTTCCAACACCGATGCCCGCACGGTGACGAACGAGATCGACAAGCTGCTCGACGAGGTGGTCAAGCTGGAGGACAGCCGGCTGCATGAAGCGGAAGTCGAGGCCGAAGCGCAGTACCAGGGCACCCGGACGATCATGGTGACGGTCTCGGTCATCGCACTCCTCGTCGCCACCATCGCCGCGGTCTGGATCGTCCTTTCGATCAACCGCGGCATCAGCCGGGCGGTCGGTGTCGTGCAGAACGTCGCGGACGGCGACCTCACCCGCTTCGCGGACATTACCACGAAGGACGAGATCGGCGACATGCTCGGCCACGTCAACACGATGATCGAGCGCCTGCGCGGGGTCGTCGCCGATGCGCTTTCGGCTTCCAGCAACGTCTCGATGGGCAGCCAGGAACTCTCCTCCAGCTCCGAACAGCTCTCGCAGGGCGCGACCGAGCAGGCTTCCTCCGCCGAAGAGGCCTCCGCCTCGATGGAAGAGATGGCCGCCAACATCAAGCAGAACGCCGACAACGCCGCCCAGACCGAGAAGATCGCCCGCCAGTCCGCCAAGGACGCGGAAGCCTCCGGCGAAGCGGTCGGCCGCGCCGTGGGCGCCATGCGCACCATCGCGGAGAAGATCTCCATCGTGCAGGAAATCGCCCGCCAGACGGACCTCCTCGCCCTCAATGCCGCGGTGGAAGCCGCCCGCGCCGGCGAGCACGGCAAGGGCTTTGCCGTCGTCGCCTCGGAAGTGCGCAAGCTCGCCGAGCGCAGCCAGGCGGCCGCCGCCGAGATCAGCACGCTGTCCGGCCAGACCGTCTCCGTCGCCACGGAGGCCGGCGACATGCTGAACCGGCTGGTGCCGGACATCCGCAAGACCGCCGAACTGGTCTCCGAGATCTCCGCCGCCTGCCGCGAGCAGGATATCGGCGCCTCGCAGATCAACGAGGCGATCCAGCAGCTCGACAAGGTGACGCAGCAGAATGCCGGCGCATCGGAAGAGATGTCCGGCACCTCGGAGGAGCTTGCCGCCCAGGCCGAGGAGTTGCAGACCTCCATCGCCTTCTTCCGCGTCGACAGTGCCGCCCGCAAGGAACCGAACCATGCCGACCGGCTGCGGGCGACCGCCGCGAAGATGGCCGCTCCCGCCGCCAAGCGTCCGGCCGCAAGCCCTGCCCATCGCCCCGCGCCGGCAAGCGCCAAGGCGGCGCGCGGCAACGGCTTTGCCCTCGACATGTCGATGGGCGGCCCGGATGCCGACGACGCGGACTTCAGGGAAAGCGCCTGA
PROTEIN sequence
Length: 566
MRFTIKLKLFLTFGFMIAVLVGTAGYGIMSLGSLNTTLSDVLNGPAARLKLAQQLSNFQLQQIRQQKNMLSSANVTETNRYVGLSDEARKEFDAAFEEVVAKATEQGKVLWSQLSTFTSDFRRNDDRIRALALAGDMDGATRLSNTDARTVTNEIDKLLDEVVKLEDSRLHEAEVEAEAQYQGTRTIMVTVSVIALLVATIAAVWIVLSINRGISRAVGVVQNVADGDLTRFADITTKDEIGDMLGHVNTMIERLRGVVADALSASSNVSMGSQELSSSSEQLSQGATEQASSAEEASASMEEMAANIKQNADNAAQTEKIARQSAKDAEASGEAVGRAVGAMRTIAEKISIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQAAAAEISTLSGQTVSVATEAGDMLNRLVPDIRKTAELVSEISAACREQDIGASQINEAIQQLDKVTQQNAGASEEMSGTSEELAAQAEELQTSIAFFRVDSAARKEPNHADRLRATAAKMAAPAAKRPAASPAHRPAPASAKAARGNGFALDMSMGGPDADDADFRESA*