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SCN18_14_9_16_R1_B_scaffold_3286_7

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(6552..7145)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWA7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 197.0
  • Bit_score: 370
  • Evalue 5.40e-100
Putative transmembrane protein {ECO:0000313|EMBL:EYR81759.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 197.0
  • Bit_score: 370
  • Evalue 7.60e-100
lysine exporter protein LysE/YggA similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 197.0
  • Bit_score: 327
  • Evalue 1.90e-87

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGCAGATCGAAATCTTTCTTGCGCTGCTCGTCTTCGCCCTCACGACCTCGATAACCCCCGGACCCAACAACATGATGCTCTTCGCCTCGGGCGTGAACTTCGGTTTCGTCCGGACGATCCCGCATATGTGCGGCATCGGTGTCGGCTTCCTCGTGCTGCTGCTTGCCGTCGGTTTCGGTCTCGGCGCGCTGCTGGACGCCGTGCCGCTCGTCTATACCGTGCTGAAATTCGCCGGCGGCGCCTATCTCGTCTGGATCGCCTGGAAGATCGGCACCGCGCGCAGTATCGGCGAGGGCAGGGCCGGTACACGGCCGATGAGCTTCCTCGAAGCCGCCGCCTTCCAGTGGGTCAACCCGAAGGCGTGGGTCATGGACGTTTCCGCCATGGCGACCTATCAGAATGCGGCGAACTATACGGCAAGCGTGCTGATCGTCGGCGTCGCCTTCGCCATCGTCAATTTCCCGAGCGTTTCCACCTGGGCCGGCTTCGGCTCGGCGCTGCGCCAGTGGTTGTCCGATCCGGTGCGGCTGAAATGGTTCAACATCGCGATGGCGCTCCTGCTCGTGGCAAGCCTCTGGCCGATGCTGCGCTAG
PROTEIN sequence
Length: 198
MQIEIFLALLVFALTTSITPGPNNMMLFASGVNFGFVRTIPHMCGIGVGFLVLLLAVGFGLGALLDAVPLVYTVLKFAGGAYLVWIAWKIGTARSIGEGRAGTRPMSFLEAAAFQWVNPKAWVMDVSAMATYQNAANYTASVLIVGVAFAIVNFPSVSTWAGFGSALRQWLSDPVRLKWFNIAMALLLVASLWPMLR*