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SCN18_14_9_16_R1_B_scaffold_3314_8

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 6539..6754

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPD1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 145
  • Evalue 1.30e-32
Cold shock protein CspA {ECO:0000313|EMBL:EYR79036.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 145
  • Evalue 1.90e-32
cspA; cold shock protein similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 71.0
  • Bit_score: 142
  • Evalue 3.20e-32

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCCGAAACTGGCATCGTAAAATTCTTCAACACCGAGAAGGGCTTCGGCTTCATCAAGCCCGACAACGGTGGTGCGGATATCTTCGTACATATTTCCGCTGTGCAGGCTTCCGGCCTGAACGGCCTTTCCGAAAACCAGAAGGTAAGCTTCGACACGGAACCCGATCGCCGCGGCAAAGGCCCGAAGGCGGTCAACCTGCAGATCGCCGGCTGA
PROTEIN sequence
Length: 72
MAETGIVKFFNTEKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGPKAVNLQIAG*