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SCN18_14_9_16_R1_B_scaffold_5263_5

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 3278..4087

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 269.0
  • Bit_score: 362
  • Evalue 4.80e-97
rluB; ribosomal large subunit pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 267.0
  • Bit_score: 347
  • Evalue 2.50e-93
pseudouridylate synthase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037FE727 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 266.0
  • Bit_score: 365
  • Evalue 3.10e-98

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGAAGGGCACCCGCAAGGCGCTGAAACCGAAAACCGGCCGTGAGGCCGGCCCGCCCGCGGGCGGAAAGAGGGTGACGCTGCCGCGCGCCCTCTCCAAGCTCGGCTTCTGCTCGCGCACGCAGGCCGAAGCGCTCGTCCGCGAGGGCCGGGTGACGGTCGGCGGCCGCGTGACGACGGACCTTGAGACCTGGGTCGACCTTTCCGATGCGGTGATCGCGGTGGACGGCAGGCGCGTCGCCGCCGAGGAGCGCGTCTACCTGATGCTCAACAAGCCGCGCGGCCTCGTCACCACGCGGCACGACCCGGAAGGCCGCCCGACGGTCTTCGATTGCCTGACCCATCTCGACCATGCGCATCTTTCCCCCGTCGGCCGCCTCGACAAGGCGAGCGAGGGGCTCCTGCTCTTCACCAACGACACGGAATTCGCCCAGGCGCTGCTCGATCCCGGGACGCATGTCGCCAAGACCTATCACGTCCAGCTCGACCGCATCGCCGACGAGGCGCTGCTCGACGCGATGATGCGCGGCGTAACGCATCACGGCGATGTGCTGAGGGCGCGCAAAGCGTGCCTCCTGCGCGAGGGCGACCGCAATTCCTGGATCGAGGTGGTGCTGGACGAGGGCAAGAACCGCCAGATCCGCCGCATGCTGGAGGCGCTGGACAGTGCCTGCCTGCGCCTCGTGCGTGTGGCGATCGGCGCCCTTGCGCTCGGCGATCTGGCGAAGGGCGCGGTGCGGCCCCTGACGCAGGAGGAGGTCGCGGATCTGCGCCGGCGCATCGCATCGCGGCGGACCGACAAGGCCGGCTGA
PROTEIN sequence
Length: 270
MKGTRKALKPKTGREAGPPAGGKRVTLPRALSKLGFCSRTQAEALVREGRVTVGGRVTTDLETWVDLSDAVIAVDGRRVAAEERVYLMLNKPRGLVTTRHDPEGRPTVFDCLTHLDHAHLSPVGRLDKASEGLLLFTNDTEFAQALLDPGTHVAKTYHVQLDRIADEALLDAMMRGVTHHGDVLRARKACLLREGDRNSWIEVVLDEGKNRQIRRMLEALDSACLRLVRVAIGALALGDLAKGAVRPLTQEEVADLRRRIASRRTDKAG*