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SCN18_14_9_16_R1_B_scaffold_4920_2

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(195..1154)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CD38_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 320.0
  • Bit_score: 542
  • Evalue 1.70e-151
AraC family transcriptional regulator {ECO:0000313|EMBL:EYR81311.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 320.0
  • Bit_score: 542
  • Evalue 2.40e-151
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 315.0
  • Bit_score: 402
  • Evalue 5.90e-110

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Taxonomy

Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12 → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGGCTGCCTCGGCGGAAATCGGACTTGTTCTCTACCCGGGCGTGCAGATGGCGGCCGTTCTCGGCATGACCGACCTTTTCAACGCGGCGACGGCGATTGCCGGGCGGAACGGACGGGCGGGGCCGAGGCTTTCGGTCAGCCACTGGCGGCTGGAGGAAGGTCGGCCGGTGCGCATCGCGTCGAGCGGCTTCGGGGAGGAGGCGGCGCGGCCCTCTGTTCTCGTGCTGCCGCCGGCGCTGGGCGATCCGATCCGGCGGGAGGATGCGGCGCCGTTTGCGGCCTGGCTGCGGCAGTGCCATGCGTCCGGCATCCAGCTCGCCTCGATCTGCGCCGGCGCCTTCCTGCTCGGCGAGACGGGATTGCTGACCGGCCGCACGATCACCACCAACTGGGTGGTCGCGGAAACGTTCGAATTGCGTTTTCCCGATGTCCGGGTCGATACGGACCGGCTCGTCAGCGACGACGGCGATATCGTCACGGCGGGCGGCGTCATGGCCTGGGTGGATCTCGGGCTGAAGCTGATCGACCGGTTTCTCGGGCCGACGGTCATGCTGGAGATCGCGCGCCGGTTCGTGATCGACCCGCCCGGCCGCGAGCAGCGCTATTACAGCTCCTTCTCGCCGCGCCTGCTGCATGGCGACGCGGCGATCCTGAAGGTGCAGCATTGGCTGCAGGCCACCGGGGCGAAGGAGACGGGCCTCGATATGCTGGCCGCGCAGGCGGGGCTGGAGGCGCGCACGTTCCTTCGGCGTTTCCGCAAGGCGACGGGGCTGACGACGACGGATTATTGCCAGCGGCTGCGGGTGGCGAAGGCGCAGGAAATGCTGCAGTTCAGCACGCGTTCCGTTGACCTCGTGGCCGTGGACGTCGGCTACAACGACCCCGGCGCCTTCCGGAAGGTCTTTGCGCGCATCGTCGGGCTGACGCCGGGGGAATACCGCAAGCGCTTCCGGACCTGA
PROTEIN sequence
Length: 320
MAASAEIGLVLYPGVQMAAVLGMTDLFNAATAIAGRNGRAGPRLSVSHWRLEEGRPVRIASSGFGEEAARPSVLVLPPALGDPIRREDAAPFAAWLRQCHASGIQLASICAGAFLLGETGLLTGRTITTNWVVAETFELRFPDVRVDTDRLVSDDGDIVTAGGVMAWVDLGLKLIDRFLGPTVMLEIARRFVIDPPGREQRYYSSFSPRLLHGDAAILKVQHWLQATGAKETGLDMLAAQAGLEARTFLRRFRKATGLTTTDYCQRLRVAKAQEMLQFSTRSVDLVAVDVGYNDPGAFRKVFARIVGLTPGEYRKRFRT*