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SCN18_14_9_16_R1_B_scaffold_6058_2

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 715..2610

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EYR78051.1}; EC=3.6.3.- {ECO:0000313|EMBL:EYR78051.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 631.0
  • Bit_score: 1179
  • Evalue 0.0
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYM6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 631.0
  • Bit_score: 1179
  • Evalue 0.0
putative ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 623.0
  • Bit_score: 1059
  • Evalue 0.0

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1896
GTGGCGACGACGACGAAGAAGACGGTTTCGGCCGACAGCAGCAATCCCCTCCACACGCTGGTGAATCTCTGGCCCTACATGTGGCCCTCCGACCGGCCGGACCTGAAGATGCGCGTCGTCTGGGCCTCTGTCTTCCTGCTCGCCTCCAAGGTCGTGCTGCTGCTCGTGCCCTATTTCTTCAAATGGGCGACGGATGCGCTGAACGGCAAGCCCGATGCCGTGGGCCTCCTGCCGACATTCCTGCTCGGCGCCGTCATGCTGGTGCTCGCCTATAACGGCGCGCGCATCGTGCAGGCAGGCCTCAACCAGCTCCGCGACGCGCTCTTCGCCAGCGTCGGGCAATATGCCGTGCGCCAGCTCGCCTACCGCACCTTCGTGCACCTGCACCGCCTGTCGCTGCGCTTCCATCTGGAGCGGCGCACCGGTGGTCTTTCGCGCGTCATCGAGCGCGGCACCAAGGGCATCGAGACGATCGTGCGCTTCACGATCCTTAACAGCATACCGACCTTCGTCGAGTTCCTGCTGACCGCCGCCGTCTTCTGGCGTGGCTACGGCCCGCAATATCTCCTCGTCACGGCCGTCACCGTATGGTTCTACATCTGGTTCACCGTCCGGGCGAGCGACTGGCGCATCTCCATCCGCCGCTCGATGAACGACAGCGACACGGAGGCGAACACCAAGGCCATCGATTCGCTTCTCAACTTCGAGACGGTGAAGTATTTCGGCAACGAGGAGATGGAGGCCCGCCGCTTCGACCAGTCCATGGAGCGCTACGAGAAATCCGCCACGCAGGTCTGGACCTCGCTCGGCTGGCTGAACTTCGGCCAGTCTCTGATCTTCGGCGTCGGCATGGCGGTCATGATGGCCATGTCCGCGCTCGCCGTGCAGCGCGGCGAGCAGACGGTCGGCGACTTCGTCTTCATCAACGCCATGCTGATCCAGCTCGCCATCCCGCTCAACTTCATCGGCTTCGTCTACCGCGAAATCCGCCAGGGCCTCACGGACATCGAGCAGATGTTCGATCTCCTGGAGGTCGAGGAGGAGGTTCAGGACAAGCCGGGCGCGGCCGACCTTGCCGTCACCGACGGCGCGATCTCCTTCAAGGACGTGCACTTCGCCTACGATCCGGCGCGGCCGATCCTCAAGGGCATTTCCTTCGACGTGCCGGCCGGCAGGACCGTCGCCGTCGTCGGCCCGTCCGGCGCGGGCAAGTCGACGCTCTCCCGGCTGCTCTACCGTTTCTACGATGTGCAGGAGGGCGCGATCACCATCGACGGGCAGGACGTGCGCGACGTCACGCAGAAGAGCCTGCGCAAGGTCATCGGCATGGTGCCGCAGGATACCGTGCTCTTCAACGACACCATCGCCTACAACATCCGCTACGGCCGGCCGGGCGCGAGCGACGAGGAGGTGGCCGCCGCCGCCGAGGCCGCCCAGATCGGCCCCTTCATCCGGCACCTGCCGGAAGGCTACAACGCCATGGTGGGCGAGCGCGGCCTGAAGCTTTCCGGCGGCGAGAAGCAGCGCGTCGCCATCGCCCGCACCATCCTCAAGAGCCCGCCGATCCTCATCCTCGACGAGGCGACCTCGGCCCTCGACACGCGCACGGAGCAGGAGATCCAGGCCGCGCTCGACATCGTCTCGAAGAACCGCACGACGCTCGTCATCGCGCACCGCCTGTCGACCGTCATCTCGGCCGACGAGATCATCGTGCTGAAGGATGGCGTGATCGCCGAGCGCGGCACGCATGGCGAGCTGATGCAGCGCGACGACGGCCTGTACGCCTCCATGTGGAACCGCCAGCGCGAGGCCGTCCAGGCCGAGGAACGGCTGAAGCAGGTGCGCGAGAGCGACGAATTCGGCATCGTCGCGCGCGGCGCGCCGGCGGCGGAGTGA
PROTEIN sequence
Length: 632
VATTTKKTVSADSSNPLHTLVNLWPYMWPSDRPDLKMRVVWASVFLLASKVVLLLVPYFFKWATDALNGKPDAVGLLPTFLLGAVMLVLAYNGARIVQAGLNQLRDALFASVGQYAVRQLAYRTFVHLHRLSLRFHLERRTGGLSRVIERGTKGIETIVRFTILNSIPTFVEFLLTAAVFWRGYGPQYLLVTAVTVWFYIWFTVRASDWRISIRRSMNDSDTEANTKAIDSLLNFETVKYFGNEEMEARRFDQSMERYEKSATQVWTSLGWLNFGQSLIFGVGMAVMMAMSALAVQRGEQTVGDFVFINAMLIQLAIPLNFIGFVYREIRQGLTDIEQMFDLLEVEEEVQDKPGAADLAVTDGAISFKDVHFAYDPARPILKGISFDVPAGRTVAVVGPSGAGKSTLSRLLYRFYDVQEGAITIDGQDVRDVTQKSLRKVIGMVPQDTVLFNDTIAYNIRYGRPGASDEEVAAAAEAAQIGPFIRHLPEGYNAMVGERGLKLSGGEKQRVAIARTILKSPPILILDEATSALDTRTEQEIQAALDIVSKNRTTLVIAHRLSTVISADEIIVLKDGVIAERGTHGELMQRDDGLYASMWNRQREAVQAEERLKQVRESDEFGIVARGAPAAE*