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SCN18_14_9_16_R1_B_scaffold_9489_1

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 3..827

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane sensory box GGDEF/EAL protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A0M1_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 254.0
  • Bit_score: 367
  • Evalue 8.30e-99
Diguanylate cyclase {ECO:0000313|EMBL:EYR80542.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 274.0
  • Bit_score: 488
  • Evalue 3.50e-135
putative transmembrane sensory box GGDEF/EAL protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 252.0
  • Bit_score: 371
  • Evalue 1.60e-100

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Taxonomy

Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
GAGATGGATGCGCGCTACGTGGATCGCCAGAAGCGCAAGGACGACCTGCGCGAGGCGCTCGCCGGCGACGCGCTCTCGGTCGCCTACCAGCCGATGTTCGTGCCGGACGGATCGCGCATCGAGTGCTGCGAGGCGCTGTCGCGCTGGACGCATCCCGAGCGCGGGCCGGTGGCGCCGAACGTCTTCATCCAGATCGCCGAGGAGATGGGGATCGTCTCCGAGATCACGCGCTTCATGATCAACCGCGCCTGTGCCGACTGCGCGACGTGGCCGGCGCATATGGGCGTCTCCGTCAATCTTTCCGTCCAGGACCTGCGCGGTACCGGCATCATCGACGTGGTGGCCGAAGCGCTGGCCAAGGCGGACCTGGAGCCGCATCGCCTGCATCTCGAAGTCACCGAAAGCTGCCTGATGGAGGAGCCGGTCAAGGTGCAGGCGATCCTGCAGGAACTGCGCGCCCGCGGCATCACCATCGCCATCGACGACTTCGGCACGGGCTATTCCAGCCTCAGCTATCTCGACCAGCTTCCGCTCGACGTCATCAAGATCGACCGGTCCTTCGTGCGCAATATCGGCGAGGACCCGCGCCGCTTCAAGCTGCTGCGCGGCACCGTGAACCTCTCGCGCGAGCTCGGCCTTCGCATCGTCATCGAAGGCGTCGAGACGCAGGAGCAGCTCGCCCTCATCAACAAGTACCATTGCGCCGACCTGGTGCAGGGCTATGTCTTCGCCGCGCCGATGTCGCCCGATGCGCTGCGCGACCGCTACGAAAGCCTAGGCGACAATCCGGACGAGCCGCGCCGCCGCGGCCGCCGCGTCGCCTGA
PROTEIN sequence
Length: 275
EMDARYVDRQKRKDDLREALAGDALSVAYQPMFVPDGSRIECCEALSRWTHPERGPVAPNVFIQIAEEMGIVSEITRFMINRACADCATWPAHMGVSVNLSVQDLRGTGIIDVVAEALAKADLEPHRLHLEVTESCLMEEPVKVQAILQELRARGITIAIDDFGTGYSSLSYLDQLPLDVIKIDRSFVRNIGEDPRRFKLLRGTVNLSRELGLRIVIEGVETQEQLALINKYHCADLVQGYVFAAPMSPDALRDRYESLGDNPDEPRRRGRRVA*