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SCN18_14_9_16_R1_B_scaffold_9500_3

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 809..2116

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB10 component n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HVE1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 436.0
  • Bit_score: 700
  • Evalue 6.60e-199
Type IV secretory pathway, VirB10 component {ECO:0000313|EMBL:EJN06758.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 436.0
  • Bit_score: 700
  • Evalue 9.20e-199
trbI; conjugal transfer protein TrbI similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 438.0
  • Bit_score: 664
  • Evalue 1.90e-188

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGGTGCAATCATTGCAACTCGGTGGAGCACCGAAGACCGGTCATCCGACCGGAATGCGTCGGGTCAACCGCCTGCCGGTCATCATCGTCATCGTGCTCGCCGTCCTCTTCCTCGCCGTCATCTTCTTTGGACTGGCGGGAAGGGGGCTCTACTTCGGCAAGGACGCGGGCATCGACCAGTCGACGGGAACGCCGGCTTCCACCTATGCCGATCAGTTGAAACAGGGCGTGACCGACGGCATCATCGGAGAGCCGCAACAGACGCAGAATTTCCAGCCGACGCCCGTCGAGACCAGGCAGGAGACGGCGAAGAACCCCTTCAGCACCGAGCCAGCGACAACGGTCGAGGAAAAGAAGAGCGAGCTCGAACCGGATGCCGTCTGGCGCGCACGTCTTCAGCGTGAACAGGAAGAACAGTACCTACGCGAGCGCCAGCGTCAGCGCATGGCGAGGCTGCAGGCGAACGCCGCCGCCTATGATGCGCCGCTCGCTCTCGACCGCAGCAAGCTCGAAGCAAAATCCGAGGTGGCGGCGGATCGATCCAACACCGCAAATGGGCAGAACAATGCTTCACCGTCCGGCGTGTCGGATCTGTATTCCGACGCCTTAAGAGATGGTCTCGGTGGGCAGAATATCGATCCCAACGGTCAGACCTCCAAGGAGAGTTTCTTCAACGCCGACATCAAGGAATTGGGTTATCTGCCGAACCAGGTGGTGCCGCAGCAATCGCCATACGAGCTCAAGCGCGGGTCGGTCATCCCGGCGACGCTGATATCAGGCATCAACAGCGACCTTCCCGGCCGCATTACCGCTCAGGTGAGCCAGCATGTCTATGACAGCGCGACCGGCCACTATCTCCTCATTCCGCAGGGAACGAAGCTCTTCGGCCGCTATGACAGCAAGGTCTCGTTCGGCCAAAGCCGCGTGCTCGTCGTCTGGACCGACATTATCTTTCCGAACGGTTCGACGTTGCAGATCGGCGGCATGGCCGGCACAGATGCACAGGGCTATGGCGGCTTCAACGACAGGGTGAACAATCACTATCTCAAGACCTTCGGCTCCGCCGTGCTCATCGCCATGATCGGAACGGGCATCGACGTGGCGCTCCCCGAAAGTTCGACGCTTGCGACCCAGGATACGGCCTCCGACGCGGCACGGCGGAATTTCGCCGAGACGTTTGGGCGCGTCGCCGAGCGGACGATCAACAGGAACCTCGACGTCCAGCCAACCCTGGAAATCCGGCCAGGCTACAAGTTCAATGTTCTCGTCGATCAGGATGTTATCTTCCCCTCAGCATACCGCGGATGA
PROTEIN sequence
Length: 436
MVQSLQLGGAPKTGHPTGMRRVNRLPVIIVIVLAVLFLAVIFFGLAGRGLYFGKDAGIDQSTGTPASTYADQLKQGVTDGIIGEPQQTQNFQPTPVETRQETAKNPFSTEPATTVEEKKSELEPDAVWRARLQREQEEQYLRERQRQRMARLQANAAAYDAPLALDRSKLEAKSEVAADRSNTANGQNNASPSGVSDLYSDALRDGLGGQNIDPNGQTSKESFFNADIKELGYLPNQVVPQQSPYELKRGSVIPATLISGINSDLPGRITAQVSQHVYDSATGHYLLIPQGTKLFGRYDSKVSFGQSRVLVVWTDIIFPNGSTLQIGGMAGTDAQGYGGFNDRVNNHYLKTFGSAVLIAMIGTGIDVALPESSTLATQDTASDAARRNFAETFGRVAERTINRNLDVQPTLEIRPGYKFNVLVDQDVIFPSAYRG*