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SCN18_14_9_16_R1_B_scaffold_9500_4

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 2537..2992

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBW8_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 150.0
  • Bit_score: 174
  • Evalue 4.30e-41
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 150.0
  • Bit_score: 174
  • Evalue 1.20e-41
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABS65511.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 150.0
  • Bit_score: 174
  • Evalue 6.10e-41

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Taxonomy

Paracoccus sp. 361_CN-SCN_Paracoccus_21x → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCGCCTGACTGGCGACCCGGAAGCCGCGTCGGATCTGACGCAGACATGCGCGGTACGGGCATTGGCAAGTTTGGCCTCGCCGGCGGAGCAAGGCGCGATGCGCTCCTGGCTTTTCAAGATCATCCGCAATGCGTGGATCGACGATTTCCGCCGGACCAAGGGAAAGGTCGCCGAACTGCCGGCCGACGCCCTCGAAAACAGCTGGCGCTACGACGACCAGTTGATCGCGGAGCTCACCGTGCGCCAGGCAATGGAGCGCATCGATCCCGTGCATCGAGAAGTCGTGACCTTGATAGACCTGGCGGGATACCGCTATGCCGAGGCGGCCGAGATTCTCGGCGTGCCCATCGGTACGGTGATGAGCAGGCTGAGCCGCGCGCGGCTCGCTCTTCTGGAAAACATCGAGCGCAATGGCGCTCCTGCGAATGAGGCGAAGAAACGCCATGAAGAATGA
PROTEIN sequence
Length: 152
MRLTGDPEAASDLTQTCAVRALASLASPAEQGAMRSWLFKIIRNAWIDDFRRTKGKVAELPADALENSWRYDDQLIAELTVRQAMERIDPVHREVVTLIDLAGYRYAEAAEILGVPIGTVMSRLSRARLALLENIERNGAPANEAKKRHEE*