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SCN18_14_9_16_R1_B_scaffold_15155_2

Organism: SCN18_14_9_16_R1_B_Rhizobiales_65_9

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(706..915)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Rhizobium giardinii RepID=UPI00037097CC similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 69.0
  • Bit_score: 114
  • Evalue 3.20e-23
Cold shock protein {ECO:0000313|EMBL:EYR81773.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 133
  • Evalue 9.30e-29
putative cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 68.0
  • Bit_score: 114
  • Evalue 9.00e-24

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Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCAACTGGCACCGTAAAGTGGTTCAACACGACCAAGGGCTACGGCTTCATTCAGCAGGACAGCGGTGAACCGGACGTTTTCGTCCACATCTCCGCCGTACAGCGCGCTGGCCTCGCAGGTCTCGACGAAGGTCAGAAGGTCAGCTTCGAGCTGATCCGTGACCGCAAGTCCGGCAAGATGTCGGCCGACCAGCTCTCCGCAGCATAA
PROTEIN sequence
Length: 70
MATGTVKWFNTTKGYGFIQQDSGEPDVFVHISAVQRAGLAGLDEGQKVSFELIRDRKSGKMSADQLSAA*