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SCN18_26_2_15_R1_B_scaffold_10918_4

Organism: SCN18_26_2_15_R1_B_Rhizobiales_68_7

partial RP 30 / 55 BSCG 32 / 51 ASCG 7 / 38
Location: 2157..3011

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1B1_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 262.0
  • Bit_score: 187
  • Evalue 1.60e-44
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 262.0
  • Bit_score: 187
  • Evalue 4.50e-45
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACB33088.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 262.0
  • Bit_score: 187
  • Evalue 2.20e-44

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGCGAACACAGAAATGTCGAACCGGGACGGCGAGGGGGGTGGGGGCGAGACGGCGGCGGCCGATGGCGAGGCCGGCGACGGCGGCAGCCGCTACCGCGTGCCGGCGCTGGAGCGCGGACTGGACGTGCTCGAGGTGCTCTCCGATGTCGAACTCGGCATGTCGCGGGCCGGCCTCGCCGATTCGCTCGGCGTCTCCGTCAGCCAGATCTTCCGCATTCTCGACTGCCTGCAGCGGCGCAAATACATAACGCTCGATCCGCGGAACAATCTGTTTTCGCTGACCTCGACGCTCTTCGAGATGTCGCACCGCCATCCGCCGACGCGCCGCCTGGTCGCGCTGGCGCTGCCGATTATTCGGGCGGCGGCGATCGCCTCGCGCCAATCGATCCATCTGTCGACCTTCGACGACGGCGAAGCCCTTGTGCTTGTGCAGTGCGAAACCAAGGAAGACTCGGGCTATTTCGTCAAGGTAGGCACCCGGCGCGACGTGTTTCTCACGGCGTCCGGCCGCGTGCTGCTCGCCTTCCAGGATGAGGAGGAGCGGCGCCGTCGCCTCGCCACCGCCGTCGCCAAGACGCCCGGCCTCATGACCGAGGCCGATTATCTGCGCCGGCTGGAAATCGTCCGGATGCAGGGCTTCGAGGAGATGCCGAGCCTGCAGATTCTCGGCGTGCACAATCTGAGCTATCCGGTCTTCGATCCCGGCGGCCATGCCATCGCCGCCATGACGCTGCCCTTCCTCGTTCGAAGCGATGTCTCCTCGACGATCGAGGATGCCCGAGCCGCGCTGCGCGACGCGGCCGAAGAACTGTCGCGCGCGCTCGGCTATGGCTGCAAGGCGGGAGGCTCTTGA
PROTEIN sequence
Length: 285
MANTEMSNRDGEGGGGETAAADGEAGDGGSRYRVPALERGLDVLEVLSDVELGMSRAGLADSLGVSVSQIFRILDCLQRRKYITLDPRNNLFSLTSTLFEMSHRHPPTRRLVALALPIIRAAAIASRQSIHLSTFDDGEALVLVQCETKEDSGYFVKVGTRRDVFLTASGRVLLAFQDEEERRRRLATAVAKTPGLMTEADYLRRLEIVRMQGFEEMPSLQILGVHNLSYPVFDPGGHAIAAMTLPFLVRSDVSSTIEDARAALRDAAEELSRALGYGCKAGGS*