ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCN18_26_2_15_R2_B_scaffold_29327_2

Organism: SCN18_26_2_15_R2_B_Rhizobiales_61_8

near complete RP 47 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: comp(547..1461)

Top 3 Functional Annotations

Value Algorithm Source
mannosyltransferase n=1 Tax=Acetobacter aceti RepID=UPI0002260403 similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 305.0
  • Bit_score: 153
  • Evalue 2.10e-34
Mannosy/glycosyl ltransferase {ECO:0000313|EMBL:GAN58529.1}; TaxID=887700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter.;" source="Acetobacter aceti NBRC 14818.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 305.0
  • Bit_score: 153
  • Evalue 2.90e-34
yfnF_[H]; Glycosyltransferase similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 254.0
  • Bit_score: 144
  • Evalue 3.60e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 → SCNPILOT_CONT_750_BF_Rhodospirillales_70_18 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
CTCAATGCGAACGGCCCGCAACCGACGATCGTCGATACCACGACATGCGACCCCGACGAGCTATTGCGAAAAATCCGGAACGGCAGCTTGGCCCCGCCAAGGAAATTGCTCCTGCTCGGCCAACCCGACACTTATGCGCGAACACTTTCATACTTGCCTCCGGATTTCATCGCGCGGAGCTGGAGGGTCGGCCATCTGGTCTGGGAAATGCCCTATTTCCCCCAGGAATGGAAATTTTTGGAAGCCGTATTGCATTGCTTCAGAACGCCCTCGAAATATTCAGCCGCCGCTATCACCAGCGGCCTGAATCTGCCGTGTGAAGTAACTCCGCACAAAGTTCAGCTGACCGAACCATCTCAGCTCTCCCGCGCGCAGATGGGCCTTCGCGAGGGCGCCTTCGTCGGCCTCGCGATCATGGATCTGCGTTCTTGCCCTGCGCGCAAAAATCCGATGGCCCACATCAACGCCTGGAAGTTGGCATTCGGCGACGATCCGAACTTTAAGCTGCTCATCAAAGCACAATTCACAAAAACAACTTTGCTCACGCGCAGCTCCATACTGCGGCGGCTCGGAAAAAACATTCAGCTCATCGAAGGCCGCCTGACGGACGCTGACATCTCTACTCTATTCCGAATGAGCGATGTCTATCTCTCGCTCCACCGCGCGGAAGGCTTCGGCCTCACGATCAAAGAGGCGCTGGAAGCCGGTGTGCCGACGATCGCGACGAACTGGTCGGCGCCCGCCGAATACTTGAACGATTACGCTCACGCCTTTCCGCTCCCCTACCGGATGACGCCATACCGCGACATGCTTCGGCACTACCGGTCTGAGGGACTCTACTGGGCGGAAGCCGACTTTGTTGCAGCTGCCGATATATTGAAGACGCTAGCCGACGCGAACGTCCGCGCACGTTGA
PROTEIN sequence
Length: 305
LNANGPQPTIVDTTTCDPDELLRKIRNGSLAPPRKLLLLGQPDTYARTLSYLPPDFIARSWRVGHLVWEMPYFPQEWKFLEAVLHCFRTPSKYSAAAITSGLNLPCEVTPHKVQLTEPSQLSRAQMGLREGAFVGLAIMDLRSCPARKNPMAHINAWKLAFGDDPNFKLLIKAQFTKTTLLTRSSILRRLGKNIQLIEGRLTDADISTLFRMSDVYLSLHRAEGFGLTIKEALEAGVPTIATNWSAPAEYLNDYAHAFPLPYRMTPYRDMLRHYRSEGLYWAEADFVAAADILKTLADANVRAR*