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SCN18_26_2_15_R2_B_scaffold_29489_1

Organism: SCN18_26_2_15_R2_B_Rhizobiales_61_8

near complete RP 47 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 12 / 38 MC: 2
Location: 229..684

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 151.0
  • Bit_score: 282
  • Evalue 7.10e-74
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 151.0
  • Bit_score: 282
  • Evalue 3.50e-73
DNA-directed RNA polymerase subunit omega n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JHE6_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 151.0
  • Bit_score: 282
  • Evalue 2.50e-73

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGCTCGCGTCACCGTCGAAGATTGCGTCGACAAGATTCCAAACAGATTTGAATTGGTTCTCCTCGCAGCGCATCGCGCGCGGTCCATCGCCAACGGCAGCTCCATCACCATCGCGCCCGATGACGACAAGAATCCGGTCATCGCATTGCGCGAGATCGCCGAACGCACGCTGTCGCCCGACGACATGCGCGAAACGCTGATCTCGTCGATCCAGAAGAACACGGAAGTCGACGAGCCGGAGGCCGTTGCAGCGCCGTTGCTGCCGCCCGAGCGCCGCGCGCCGATGCTCGGCCGCGACGATCTTTCGTCGGACACTCAGGTCGATGTCATGACCGAAGAGCAGCTTTTGCGCGGGCTGGAGAGCATGACGCCGCTCGAGCCTTCTGCCAACATCGGCTCGGGCTCGGGCTCCGGCCGCGAGCGGGACCGCGATCCGCGCGACCGTTCTCGCTAA
PROTEIN sequence
Length: 152
MARVTVEDCVDKIPNRFELVLLAAHRARSIANGSSITIAPDDDKNPVIALREIAERTLSPDDMRETLISSIQKNTEVDEPEAVAAPLLPPERRAPMLGRDDLSSDTQVDVMTEEQLLRGLESMTPLEPSANIGSGSGSGRERDRDPRDRSR*