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SCN18_30_10_14_R2_B_scaffold_3644_9

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(8573..9196)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y598_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 202.0
  • Bit_score: 203
  • Evalue 2.00e-49
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 202.0
  • Bit_score: 203
  • Evalue 5.80e-50
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACB33486.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 202.0
  • Bit_score: 203
  • Evalue 2.90e-49

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGCATCACGTCGCCGCCAACTTGGGAAGCGAGCAAGACTGTGACCGGGTCGTCGCGGAGACGTTGGCATTCTGCGGCGGGCTGGATGTCCTGGTCTCCAACGCCGGCATGGTGAGCCCCCGCCCCTTATTGTCCGCCGATGCAGCGGCATGGGACCGATTGTTCGCTGTAGATGCCCGCGCCACGCTGCTTCTCGCACGCGGCCTCCATGGTGCGCTAAAGGAAAGCCGCGGCGCGATCGTCGCAATCGCATCGACGTCCGGCCTCTTTCCGCATGTCGGACATGGCGTCTATTCACCCGCCAAGGCCGCCCTGATCATGCTGGTCCGCCAGATGGCGCTCGAATGGGCGAGCGACGGGATCCGCGCCAACGTGGTCGCTCCCGGGCTGATAGAAACCCCTCTTACAGCGCCGATCTATGCGAACGCGGAAATGCGGGCCGCCCGTGAACGGGTGGTGCCGCTGGGGCGGATCGGCCGTTCGGACGACGTCGCCGAGGCCGTATTCTTCCTGGCGTCCGCAGCCACATCCTACATCACGGGACAGATCATGGCGGTCGATGGCGGCATCGCCGACGCAGCCCTCCTGCGCATTCCTGGAATGCCGCCCGCAGCACCCCGCTGA
PROTEIN sequence
Length: 208
VHHVAANLGSEQDCDRVVAETLAFCGGLDVLVSNAGMVSPRPLLSADAAAWDRLFAVDARATLLLARGLHGALKESRGAIVAIASTSGLFPHVGHGVYSPAKAALIMLVRQMALEWASDGIRANVVAPGLIETPLTAPIYANAEMRAARERVVPLGRIGRSDDVAEAVFFLASAATSYITGQIMAVDGGIADAALLRIPGMPPAAPR*