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SCN18_30_10_14_R2_B_scaffold_3678_6

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(6197..7108)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EB63DE similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 300.0
  • Bit_score: 555
  • Evalue 3.10e-155
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1287074 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C105A0.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 300.0
  • Bit_score: 553
  • Evalue 9.70e-155
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 300.0
  • Bit_score: 552
  • Evalue 5.70e-155

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCCCAGAATTTACCCAGTATCGTTTCCGGCGAAGGCGGTCTGTCCCGCTATCTCGAAGAGATACGCCGTTTTCCCATGCTGCAGCCGCAGGAAGAGTACATGCTCGCCAAGCGCTACAGCGAACATGGCGACACCAACGCGGCGCACAAGCTCGTGACCAGCCATTTGCGCCTCGTGGCGAAGATCGCCATGGGCTATCGTGGCTATGGCCTGCCGATCGGCGAGGTCATTTCCGAAGGCAATGTCGGCCTCATGCAGGCCGTGAAGAAGTTCGAGCCGGAGCGCGGCTTTCGGCTGGCCACCTACGCCATGTGGTGGATTAAGGCTTCGATCCAGGAATATATCCTGCGTTCGTGGAGCCTCGTGAAGATGGGCACCACTGCCAACCAGAAGCGTCTGTTCTTCAACCTGCGCAAGGTGAAGGGTAAGATCCAGGCGCTCGACGACGGCGATCTGAGACCCGACCAGATCAGCGAGATCGCGACACGGCTGAACGTCAGCGAGGACGAGGTGGTCTCCATGAACCGCCGCCTTTCGGGTGATGCTTCGCTCAACGCGCCGATCCGCGCCAGCGAGGGTGAGTCCGGCGAATGGCAGGACTGGCTGGTGGACGACCACGAGAGTCAGGAAGACATGCTGGTCGAGCAGGACGAGCTCGAAAACCGGCGCGGCATGCTCGGCGAGGCACTGACCTTGCTGAACGACCGTGAACGCCGCATCTTCGAGGCGCGCCGTCTCTCCGACGAGCCGATGACGCTGGAGGAACTTTCCGCCGAATTCGGCATCAGCCGCGAACGCGTCCGCCAGATCGAGGTCCGGGCGTTCGAGAAGGTGCAGGACGCGGTGAAGGCGGCGGCCAAGCGGCAGGCGCAATCGCTCCGCACCATCGAGGCCGAGGCACGCCCTTAA
PROTEIN sequence
Length: 304
MAQNLPSIVSGEGGLSRYLEEIRRFPMLQPQEEYMLAKRYSEHGDTNAAHKLVTSHLRLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFEPERGFRLATYAMWWIKASIQEYILRSWSLVKMGTTANQKRLFFNLRKVKGKIQALDDGDLRPDQISEIATRLNVSEDEVVSMNRRLSGDASLNAPIRASEGESGEWQDWLVDDHESQEDMLVEQDELENRRGMLGEALTLLNDRERRIFEARRLSDEPMTLEELSAEFGISRERVRQIEVRAFEKVQDAVKAAAKRQAQSLRTIEAEARP*