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SCN18_30_10_14_R2_B_scaffold_3960_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1606..3114

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 factor interaction domain-containing protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2C2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 519.0
  • Bit_score: 719
  • Evalue 2.10e-204
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:EHH14105.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 519.0
  • Bit_score: 719
  • Evalue 2.90e-204
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 511.0
  • Bit_score: 710
  • Evalue 2.10e-202

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGACCGGTCCCATTCTCATCGTCGACGACGATCCGGTGCAGCGGCGCCTGCTACAGGCCGCCGTTACGAAGGCCGGTTATGAGGCGCTGCTGGCCGAAGGCGGCGAAGTGGCGCTCAGGCTCCTCGACGCGAACGACGTTTCGGTCGTCATCCTCGATCTCGTCATGCCGGACCTTGGTGGTATCGAGGTGCTGAAGCGCATGCGCGACCGGGGCATGTTCATCCCCGTCATCGTGCAGACCTCGCAAGGCGGCATCGAGACGGTGGTTACGGCGATGCGCAACGGCGCCTTCGATTTCGTGGTCAAGCCGGCCTCGCCGGAACGTCTTCAGACGGCCATCGCCAACGCGCTCAAGGTCGAGGCGCTGGGCGACGAGGCCAAACGCGCGCGCCGTCCTGCCGGCAGCACGCTGACCTTCAGGGATCTCGTCACCGGCAGCCCTGCCATGGAGCGCGTGGTCCGCCTCGGGCGGAAGGCGGCCGCGTCGAACATCCCTATCCTTATCGAAGGCGAATCAGGTGTAGGCAAGGAACTGGTGGCGCGCGCCATCCAGGGCGCAGGCGAGCGCAAGAACAGGCCTTTCGTCACCGTCAATTGCGGCGCTATCCCCGAAAATCTTGTGGAAAGCATCCTGTTCGGCCACGAAAAGGGAGCCTTTACCGGCGCCACCGAAAAGCACACCGGCAAGTTCGTGGAGGCCCATACCGGGACGCTGTTCCTTGACGAGATCGGTGATCTGCCGCTCGACGTGCAGGTAAAGCTTTTGCGCGCGGTGCAGGAAGGGGAGGTCGATCCGGTCGGTGGACGCGGTTCCGTGAAGGTCGATATAAGGCTTGTCTCGGCGACCCATCGCGACCTCCTGCAGCGCGTGAAGGACGGACAGTTCCGCGAGGACCTGTTTTACCGGCTCAATGTCTTCCCGATCCACGTGCCGCCGTTGCGCGACCGGCGGGAAGACATTCCCGCGCTGGTCGAGCATTTTCTGAGCCGTGTCGGCGCGTCGGGGCCGGCAAGGCCGGTGACGGGCATAACGCCGCAGGCGCTCGCCATGCTGGGGGCCTATGACTGGCCCGGCAATATCCGCCAGCTGGAAAACGCGGTGTTCCGCGCCGTCGTGCTCTGTGAGACGGGCATCCTCGGTATAGAGGAGTTCCCGCAGATCAGGGGGCAACTCGACGGTTTCGACCTGTCCGGCTACGTGGAAGCCGACACGGAACCGGCGGCAGCGCCGGAGACCGACGCTCTCCCGCCCACGGGCGGGGACACCTCGCCGGACGTCCGGACGAGCGCCCATTTCGGCATTCTTCGTGCCCTGGACGATCGCGGCAATGTGCGCTCGCTCGCCGATGTCGAGCTGGAAATGATCCAGCTTGCCATCGGCCGTTATGGCGGCCAGATGAGCGAAGTGGCCAGAAGACTGGGCATCGGCCGCTCGACGCTTTACCGCAAACTCAAGGAATACGGGATCGATCCCGAGGATGGACGCTCCGCCAGAATGGCGTCCTGA
PROTEIN sequence
Length: 503
MTGPILIVDDDPVQRRLLQAAVTKAGYEALLAEGGEVALRLLDANDVSVVILDLVMPDLGGIEVLKRMRDRGMFIPVIVQTSQGGIETVVTAMRNGAFDFVVKPASPERLQTAIANALKVEALGDEAKRARRPAGSTLTFRDLVTGSPAMERVVRLGRKAAASNIPILIEGESGVGKELVARAIQGAGERKNRPFVTVNCGAIPENLVESILFGHEKGAFTGATEKHTGKFVEAHTGTLFLDEIGDLPLDVQVKLLRAVQEGEVDPVGGRGSVKVDIRLVSATHRDLLQRVKDGQFREDLFYRLNVFPIHVPPLRDRREDIPALVEHFLSRVGASGPARPVTGITPQALAMLGAYDWPGNIRQLENAVFRAVVLCETGILGIEEFPQIRGQLDGFDLSGYVEADTEPAAAPETDALPPTGGDTSPDVRTSAHFGILRALDDRGNVRSLADVELEMIQLAIGRYGGQMSEVARRLGIGRSTLYRKLKEYGIDPEDGRSARMAS*