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SCN18_30_10_14_R2_B_scaffold_4360_6

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(5140..6354)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS 1 transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TYR3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 404.0
  • Bit_score: 667
  • Evalue 5.70e-189
Major facilitator superfamily MFS 1 transporter {ECO:0000313|EMBL:ENN85519.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 404.0
  • Bit_score: 667
  • Evalue 8.00e-189
major facilitator superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 404.0
  • Bit_score: 665
  • Evalue 8.00e-189

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
GTGAATACCGAGATTTCTCCGACCGCCGCGACGGCCGATTTATCCTCGACTGCCCGCTGGGCGCTTGTCGCTCTTGCCATCGGCGCGTTCGGGATCGGCACGACCGAGTTCTCGCCGATGGGGCTGCTGCCCGTCATCGCGCAGGGGGTCGACGTCTCGATCCCGACGGCCGGCCTGCTCATCAGCGCTTATGCCGTCGGCGTCATGGTCGGGGCGCCGATCATGACGCTCGCCTTCAGCCGTCTCGGCAAGCGCACCGCACTGATGCTCCTTATGGGCATCTTCACTATCGGCAACCTGATGTCTGCGATGGCGCCGGGCTACTTCACGCTGCTCGCCGCAAGGCTGGTCACCAGCCTCAACCACGGCGCCTTCTTCGGCCTCGGCGCGGTGGTGGCGGCAAGCGTGGTGCCGAAGGAAAAGCAGGCGAGCGCGGTGGCTGCCATGTTCATGGGGCTTACCATCGCCAATATCGGCGGCGTACCGGCTGCGACCTGGATCGGCCAGCAGATTGGCTGGCGCATGGCTTTCGCCGGGACGGCGCTGATCGGTCTCGCCGCCATCGCTTCGCTTTGGTTTGCCCTGCCGAAGGGCGAACACGGCACGATCCCCGATGTCAAGCACGAGCTTCGCGTCCTCACCCGACCGGCTGTGTTGCTTGCCATGGCGACCACCGTCATGGGAGCCGGGGCGATGTTCACGCTTTACACCTATGTCGCCCCTGCCCTCAACACGCTGACAGGCGCTTCCGGCAGCTTCGTAGCCTTCGCTCTTGTGCTGATCGGGGTCGGTTTCACCATCGGCAATTGGCTGGGCGGACGGTTGGCCGACTGGTCGCTCGACGGTGCCACCAAAATCTTCCTCGGCGCGCTGACGACGATCATGCTTGTGCTGCCGCTGGCCTTCACCAGCCGTGCTGACGCGGCCATCGGCCTGCTCGTCTGGGGCGCGGCTGCCTTCGCCATCGTCCCGCCTGTGCAGATGCGGGTAATGCAAGCCGCATCGGAGGCGCCGGGCCTTGCCTCCTCCGTCAACGTCGGCGCCTTCAACCTCGGCAACGCGTTGGGCGCGGCGCTCGGTGCCGGGGTCATCGGCACTGGGCTCGGCTATACTGCCATTCCCGTCACCGGCGCCCTGCTCGCCGCCGCCGGGTTCGGCATGGTGCTGATGGGCGGCCGCGAAAAATCCCCACCTCTCAGGACATGTAACGCCTGA
PROTEIN sequence
Length: 405
VNTEISPTAATADLSSTARWALVALAIGAFGIGTTEFSPMGLLPVIAQGVDVSIPTAGLLISAYAVGVMVGAPIMTLAFSRLGKRTALMLLMGIFTIGNLMSAMAPGYFTLLAARLVTSLNHGAFFGLGAVVAASVVPKEKQASAVAAMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTALIGLAAIASLWFALPKGEHGTIPDVKHELRVLTRPAVLLAMATTVMGAGAMFTLYTYVAPALNTLTGASGSFVAFALVLIGVGFTIGNWLGGRLADWSLDGATKIFLGALTTIMLVLPLAFTSRADAAIGLLVWGAAAFAIVPPVQMRVMQAASEAPGLASSVNVGAFNLGNALGAALGAGVIGTGLGYTAIPVTGALLAAAGFGMVLMGGREKSPPLRTCNA*