ggKbase home page

SCN18_30_10_14_R2_B_scaffold_5034_7

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 5526..7028

Top 3 Functional Annotations

Value Algorithm Source
Ribose import ATP-binding protein RbsA {ECO:0000255|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000255|HAMAP-Rule:MF_01716};; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 499.0
  • Bit_score: 355
  • Evalue 6.40e-95
D-ribose transporter ATP binding protein n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1AKV2_9NEIS similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 495.0
  • Bit_score: 355
  • Evalue 4.60e-95
rbsA; D-ribose ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 499.0
  • Bit_score: 355
  • Evalue 1.30e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → SCNPILOT_CONT_500_BF_Rhizobiales_63_22 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1503
ATGACCGAAGCACTGCTCAGAGTCGAGAACGTTTCGAAGGCATTCTTCGGGATTCCGGTCCTGCAGGATGTCGGCCTCTCGCTTCGCCGCGGCGAGATTCTCGCTCTTCTCGGCGCCAATGGCGCCGGCAAATCGACGCTCGTCAAGGTGATCTGCGGTGCCCATGACGCGGATTCGGGCGCGATTTGGATCGACGGACGCCGCCAGACCTATCGCACGGTACGGGAAGCCGTCGCCGCCGGCGTCTCGGTAGCGCACCAGCATAACATGACTATCTCGCGCCTGACGGGAGCGCAGAACATCGAGCTCGGCCGCGAGCCAACGCACTTTGGCTTGATCAACCGGCGCGAACTCAGGCGCCGGGCGGAGGCACTGTGGCGTGAATTCGATGTCGATATCGACATCGACGCGGAATGCGGCGATCTGGCGCCGGGAGAGCAGAAGATCCTCGATATATTGAAGGCGCTAGCGACGAATCCGCAGATCCTCATTCTTGACGAGCCTACCGCCACGCTGACAGTGGGCGAGAGTAAGCGCCTCTTCGCCTTTCTCGACCGGTTGCGCCGACGGGACATGGGCATCGTCTTCATTTCCCATCATCTCCAGGAAGTGTTCGACCATTGCGACAGGGCCGCTGTCCTGAAAGATGGGCGGATGGTGTTTCAAGGCGACGTCGCGGGACTGACGCGCGAGGACCTTGTCCGCATGATGATCGGCAAGCCGGTCGAGATCGCCAGCTGCGCAAAGGCGAGCAGCGGTGAGGATTTTGTCGTTTCGCTCCGGGATATGCAGGTCGGGCCTTTGCATGTCGAGGCTTTCGAAGCCACACGAGGAGAGGTCGTCGGGATAGCCGGCCTTATCGGCTCGGGCCAGACGGAACTGCTTCAATGTCTCGCGGGCGCCCGCCGGCCAACCAGGGTAGGGTCAGCCAGCCTCTTCGGACGACCAGGCCTGCCGGCGTCCGTTGGCAACGCTGTTGGGCGCGGCGTACATTTCATTCCAGACGACCGGGCGAGCAATGCTATGTTCGCGGCACTCTCGGTCGAAGAAAATCTTTCGACCGCCTCGCTCGGTGGCCTGTCCCGGCGTGGCTTCTTCCGCCACCGTGACGCGAATAGCCGGGCGGATGCGCTGATCGGTTCCCTTTCCATAAAATGCCGCGACCGGCGTCAGGCGATCAGCGAACTTTCCGGGGGCAACCAGCAGAAGGTTTCGTTCGCACGCTGGCTCTCTCGGCCGGGACGAACGGACGGCGGACGGGAGAACCGGCTTTTCCTGCTCGACAACCCCACCGAGGGCGTCGATGTCGGCGCGAAGGCGGAATTCTACGCGCTGATCCGGGAACTTACCGCCGGGGGTGCGACGATCATCGTGGCCAGCGTGGAGTTCCAGGAACTCATCACGCTCTCCAACAGGATCTATTGCATCGCGCGGGACACGCTGCGCGACCATTTTCCGGCGGCGGACATGACCGAAGAAACCTTGCTGCTCAAGACCAACTAG
PROTEIN sequence
Length: 501
MTEALLRVENVSKAFFGIPVLQDVGLSLRRGEILALLGANGAGKSTLVKVICGAHDADSGAIWIDGRRQTYRTVREAVAAGVSVAHQHNMTISRLTGAQNIELGREPTHFGLINRRELRRRAEALWREFDVDIDIDAECGDLAPGEQKILDILKALATNPQILILDEPTATLTVGESKRLFAFLDRLRRRDMGIVFISHHLQEVFDHCDRAAVLKDGRMVFQGDVAGLTREDLVRMMIGKPVEIASCAKASSGEDFVVSLRDMQVGPLHVEAFEATRGEVVGIAGLIGSGQTELLQCLAGARRPTRVGSASLFGRPGLPASVGNAVGRGVHFIPDDRASNAMFAALSVEENLSTASLGGLSRRGFFRHRDANSRADALIGSLSIKCRDRRQAISELSGGNQQKVSFARWLSRPGRTDGGRENRLFLLDNPTEGVDVGAKAEFYALIRELTAGGATIIVASVEFQELITLSNRIYCIARDTLRDHFPAADMTEETLLLKTN*