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SCN18_30_10_14_R2_B_scaffold_6850_8

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 6355..7149

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWJ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 278.0
  • Bit_score: 317
  • Evalue 7.30e-84
Hemolysin D {ECO:0000313|EMBL:ESY81860.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 275.0
  • Bit_score: 317
  • Evalue 1.00e-83
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 284.0
  • Bit_score: 316
  • Evalue 6.00e-84

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGCCAAAGATAACCTTCCACAAGCTGGCGGCCTTCGTCGTGTTCGCGATCGCGGCGGCGTGGGTGCTGACCGGCGAGATGGCTTCGGTCGGCAGCGCGAGGCAGGAAGATGCGGCGAAGACGCCCGAGGCGGCGGAAGCGCCGGCTCCGGTCCGCACGATCGGCGTCATCGACGCGCCGAGGGAGATGCATGCCCGCGCCATCCGCATCGCCGGCCATACCGAGGCGGACAAGCGCGCGGTGCTCGGCACGCGCGCCGCGGGCGTCATCACCACGCTTCCGGTCAAGGAAGGGCAGCGCGTGAAGGAGGGCGACCTGATCCTTTCCCTCGACAACGCCGACAAGATCGCCGCCGTCGATATGGCAAAGCAGGTCGTGTCGCAGCGCGAGGCCGAGATGGAAGCCGCCGAACGGTTATCCAAGACGGGCAACATGGCCAAGCTGACGCTCGACAGCGCCCGCTCCGCGCTCTCCACGGCCCGTTCGCAGCTTGAGGCGGCGAGGGCCGAGGAAAACAAGACCGAAGTGCACGCGCCTTTCGATGGGCTGATCGACAGGGTGCCGGTCGAGAAGGGCAGTTCGGTGCAGGTCGGCGCCGAGGTGGCGACGATCCTTGCGCTAGATCCCGTCATCGCGGCCGGCGAGGTGAGCGAGCGCGACCTCGATCATGTGAGGCTTGGCGATGAAGCCGACATAAGGCTGATCGACGGTCGCCAGGTGAAGGGTACGATCCGCTATATCAGCCGCGAGGCGGCCACGGCGACGCGCACCTTCCGCGTCGAGGTCGCCATCTCC
PROTEIN sequence
Length: 265
MPKITFHKLAAFVVFAIAAAWVLTGEMASVGSARQEDAAKTPEAAEAPAPVRTIGVIDAPREMHARAIRIAGHTEADKRAVLGTRAAGVITTLPVKEGQRVKEGDLILSLDNADKIAAVDMAKQVVSQREAEMEAAERLSKTGNMAKLTLDSARSALSTARSQLEAARAEENKTEVHAPFDGLIDRVPVEKGSSVQVGAEVATILALDPVIAAGEVSERDLDHVRLGDEADIRLIDGRQVKGTIRYISREAATATRTFRVEVAIS