ggKbase home page

SCN18_30_10_14_R2_B_scaffold_5815_9

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(6528..7556)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3CC48_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 30.1
  • Coverage: 336.0
  • Bit_score: 172
  • Evalue 6.40e-40
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EJN02704.1}; Flags: Precursor;; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.1
  • Coverage: 336.0
  • Bit_score: 172
  • Evalue 9.00e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGACAATCAATCGCCGCGACCTCATTAAAGCTGCAGCAGCCGGAACCACCCTCGGCTGGCTCGGCCAGACACCCGCCCTCGCGCAGGACAAATCCATCAAGATCATCTCCTGGGGAGGCAGCTATGGCGAAGCCATGCGCTCGGCCTGGATGGATCCGTTCACCGCGGCTTCCGGCATCCGTTCCGAGCTGCGTCTGCAGTCGGGCATGATGGAGACGCTTGCCTCGTTGCGTGCCAACAAGGGAAGGATCGATGACGACCTCTGGGTGACCGGCGTGACCCCGACCGTACTTGCCAAGCAGGACGGGCTTCTCGAGCCCATTCCTGTCGGCCAGTTGAAAAATGCCGGACAACTGCCCGCCGAGATGGTCAACGAGACCTATGTCGGCGTCTGGCGTCTGCCCTTCGGGATCATCTACAATCCCGAAACGGTCCCTTTCGAGATTACTAAATGGACCGACCTGTTCGACGAGCGGCTAAAGGGCAAGCTCACGGCCCCGCAGGGTAGCGGTTACAATGGGCGCTTCATCGCCCTTCTCGCCTGGCTCGCCGGTGGCGACGAAAACAATGTCGACCCCGGCTTCGAACTCGCGAAGAAACTCACGCCGAACGTCTCGATCTTCACCAGCGCCGATCCCGAACAGGTCCGGCTGCTGTCGTCGGGCGAAGTGGATGTGGCGGCCTTCGCCCCCGTCGGCAACTATATCAGCCTTCGCAAATCGGCACCGCAATATCGCTTTGTCTGCCCGAAGCCCTACATCCCGATGAGCTTCAACAACATCGTGATCCTCAAGGGCGCCAACGTCGCCGCGGCAACAGCCTTCATCGACTTCATCATCAGCAAGGAGCCGCAGGAGAAGATCGCTGAGATGCTCGGCTTCCTGCCCATGACCGAGCAGGCGGAGTTGCCGGCGGCGCTGCGCGAACTCGTTCCTCCAGGAACGGAGGTCCGATATCCCGACGAGGTGGCAATCGCCGACAAACTGACGGCATGGGCCGATCGCTGGCAGCAGGAAATCCAGCGCTGA
PROTEIN sequence
Length: 343
MTINRRDLIKAAAAGTTLGWLGQTPALAQDKSIKIISWGGSYGEAMRSAWMDPFTAASGIRSELRLQSGMMETLASLRANKGRIDDDLWVTGVTPTVLAKQDGLLEPIPVGQLKNAGQLPAEMVNETYVGVWRLPFGIIYNPETVPFEITKWTDLFDERLKGKLTAPQGSGYNGRFIALLAWLAGGDENNVDPGFELAKKLTPNVSIFTSADPEQVRLLSSGEVDVAAFAPVGNYISLRKSAPQYRFVCPKPYIPMSFNNIVILKGANVAAATAFIDFIISKEPQEKIAEMLGFLPMTEQAELPAALRELVPPGTEVRYPDEVAIADKLTAWADRWQQEIQR*