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SCN18_30_10_14_R2_B_scaffold_7782_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1402..2226

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2LEZ2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 273.0
  • Bit_score: 411
  • Evalue 6.50e-112
Peptide ABC transporter permease {ECO:0000313|EMBL:KGE00141.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 273.0
  • Bit_score: 417
  • Evalue 9.80e-114
yddQ; Inner membrane ABC transporter permease protein YddQ similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 273.0
  • Bit_score: 413
  • Evalue 3.70e-113

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGATTGATTTCTCCAGACGCCTGATCCGCTCGCCGCAAGGCGCGGCTGGGACGGTCATCGTCCTGCTCGCGATCCTGATAGCGGCGGTCGGTCCTGACATCGCCCCCTATGACCCTTCCGCAATGTCACCGCTGCTGCGTTATCAGGGGCCGAGCCTGGCGCACCTTCTGGGCACCGACGAATATGGCCGCGATATATTGAGCCGGCTTCTCTTCGGTGCACGCTCGACCGTTACGATGGCCGTTCTCGCGACCTTTCTCGGAACGCTCGTCGGCTCCGTCATCGGAACGATCTCGGCCTTTCTGGGCGGCCGCGCCGACGAAGTGATCATGCGCACCATGGATGCGGTCATGTCCATTCCAAGCCTGCTCTTCGCGCTCCTCATCGTCAATCTTCTGGGATCCAACAGCGTCAATGCCCTGCTTGCCGTGGCGATCACCTTCATACCCGCCATGGCCCGCGTCACGCGTAGCGTCGCGCTGGCGGTGCGCAAGCAGGATTACATCAACGCGGCGGTCGCCAGGGGCGAGACGGGCCTTTATGTCGTCACCCGCGAGATGCTTCCCAACGTTATCGCGCCGGTCATCGTCGAGACGACCATCCGGGTGTCCTTTGCCATCATGCTCTTCGCGACGCTGAGCTTCCTCGGGCTGGGCGCCCAGCCGCCGGCGCAGGAATGGGGCCTGATGGTGGCCCAGGCGCGCCAGTACATGCATTTGAGTGCGTGGATGCTGATCTGGCCGAGCACGGCGATTGCCATCGTCGCCATCGGCTTCAACCTGCTCGGGGACGGTCTCCGCGACGTCCTCAATCCCAGACTGTGA
PROTEIN sequence
Length: 275
MIDFSRRLIRSPQGAAGTVIVLLAILIAAVGPDIAPYDPSAMSPLLRYQGPSLAHLLGTDEYGRDILSRLLFGARSTVTMAVLATFLGTLVGSVIGTISAFLGGRADEVIMRTMDAVMSIPSLLFALLIVNLLGSNSVNALLAVAITFIPAMARVTRSVALAVRKQDYINAAVARGETGLYVVTREMLPNVIAPVIVETTIRVSFAIMLFATLSFLGLGAQPPAQEWGLMVAQARQYMHLSAWMLIWPSTAIAIVAIGFNLLGDGLRDVLNPRL*