ggKbase home page

SCN18_30_10_14_R2_B_scaffold_7600_7

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(4306..5055)

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid uptake family ABC transporter, permease protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RSU9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 245.0
  • Bit_score: 381
  • Evalue 5.00e-103
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:CDX16715.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 248.0
  • Bit_score: 434
  • Evalue 7.00e-119
Polar amino acid ABC transporter, inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 249.0
  • Bit_score: 374
  • Evalue 1.30e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_P_Mesorhizobium_63_10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
TTGCTGCAATGGATCGCCGAATGGTTCCGTAGTCTTTACGAGACCACAGGGCTGAACTTCACCATCTTCTACGATCCCTACGATGCGAAGCAATTCATCGCAGGCATCGGCATGACGATCTATCTAAGCGTCGTATCGATCCTGATCAGCATCGTCATCGGCGTCATCGGCGCCTGGCTTCAGATGTCGCGGTTCGCGCTTGTGCGCGGCGTCATCGAGGTGTTCGTCGTCATCTTCCGCAACACGCCTCCGCTCGTGCAGATATTCTTCTTCTATTTCGGGTTGGGGGCGCTCCTGCCCTCGTCCTACAACGACATTGGCCTGCGCGAACCTCTCCTCACCAATGTGCAGTGGGCGATCGTTTCGCTTTCGCTGTTCGCCGGCGCCTTCAATATCGAGATTTTCCGCTCCGGCATCCAGGCCGTGCCGCGCACCACGATCGAGGCCGCCGAGGCACTCGGCTATACGCAGCTCGGCGCTTATCGCTACGTCGTTCTGCCGCTTGCGCTGCGTGTCTGCCTTCCGGCGCTGAACAACAACCTTGTCAATCTCCTGAAGACCACGACGCTCGCCTACGCCATCGCCGTGCCGGAGACACTCTACGCCTCCGCGCAGATCTGGGCGCAATCGCAGAACGTCACGGAGATGATGTGCGTGCTCCTTGCCGTGTTCGTTCTCCTCGTCGGCGTGCTCGTCTGGATCATGCATCGATGGGAACGCGCATTGCGCATTCCGGGGTTCGGCCGATGA
PROTEIN sequence
Length: 250
LLQWIAEWFRSLYETTGLNFTIFYDPYDAKQFIAGIGMTIYLSVVSILISIVIGVIGAWLQMSRFALVRGVIEVFVVIFRNTPPLVQIFFFYFGLGALLPSSYNDIGLREPLLTNVQWAIVSLSLFAGAFNIEIFRSGIQAVPRTTIEAAEALGYTQLGAYRYVVLPLALRVCLPALNNNLVNLLKTTTLAYAIAVPETLYASAQIWAQSQNVTEMMCVLLAVFVLLVGVLVWIMHRWERALRIPGFGR*