ggKbase home page

SCN18_30_10_14_R2_B_scaffold_9552_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2..340)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MAL4_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 112.0
  • Bit_score: 99
  • Evalue 2.30e-18
LivF protein {ECO:0000313|EMBL:BAQ49872.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 86.0
  • Bit_score: 100
  • Evalue 8.40e-19
branched-chain amino acid ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 112.0
  • Bit_score: 99
  • Evalue 6.40e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGGAGTAAGCCAACACGAAAATGGACTGCAGCCAGCCCAAAGCACCCAGTCAGGCGCTTCCGGCGTGCCGGCGGAGCCGGCCGTCTCCGTGCCCGACCTCGCGCTCGCGCCCGGCACGCTCGCCGGAGTGGTCGGCGCCAACGGCGCGGGCAAGACCACGCTGGTGAACGGCATCCTCGGCTGGTCGCGCGGCCCCGCCCGCGTCACCGGCACCGTGCGGCTCGACGGCTACGACCTTGGCCCCCTCGCCGTGCATGCGCGCGTCCGCCGCGGCCTGCTGCTCGTCCCCGAAGGGCTCGCCGTGTTCGGCACCATGAGCGTCGAGGAGAACCTGCGC
PROTEIN sequence
Length: 113
MGVSQHENGLQPAQSTQSGASGVPAEPAVSVPDLALAPGTLAGVVGANGAGKTTLVNGILGWSRGPARVTGTVRLDGYDLGPLAVHARVRRGLLLVPEGLAVFGTMSVEENLR