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SCN18_30_10_14_R2_B_scaffold_7032_6

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 3774..4469

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=2 Tax=Bordetella bronchiseptica RepID=Q7WJK9_BORBR similarity UNIREF
DB: UNIREF100
  • Identity: 33.0
  • Coverage: 218.0
  • Bit_score: 125
  • Evalue 4.60e-26
Crp-like helix-turn-helix domain protein {ECO:0000313|EMBL:KCB40377.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 222.0
  • Bit_score: 126
  • Evalue 3.80e-26
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 218.0
  • Bit_score: 125
  • Evalue 1.30e-26

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGCCGACAATCAGGCTCTTTTCCGAGAGAACCCATGGTTGCGGGGTCTCTCCGCGGCGACCGTGGTCACATTGGCAAGCAAGGCGATCGTCCGGCGACTGGCGCATGGTGAATTGTGGGTGTCTCGCAGCGAGCGCGCCAGCGGCATCGCCATCATCGTCGAAGGCGGCCTCCGCTCCACGACTTTCACGGCCGAAGGCAAGGAATATGTCTTCTCCATTATGAAAACGGGGGACATCTGGGGCCTTGTGTCGACGATCGACGGCATCCACAACGCCAATGACGTCTATGCGCATGGGGAAACGACCCTGCTTACGATCGACCGGCGTACGACACTGGCGACAATGGACAGTTGCCCCGATTTCGGACGGTCTCTGATGGGGTTGCTCTGCTATCGCCTCAGGATGGCCAATACGGTGCTGGAAGACCGCGCGCTGAAGCCTCTGGAGGTAAGGCTTGCCCGCCTTCTGCTCAGCCTTCGCGGCAACAGCGATGTGGCCCATAATGCGAACGAACTCCAGGTGACTCAGGAGATGCTGGCGAAAATTCTCGGATGCACCCGTCCGACGGTGAACAAGAAGCTCCTGCAGCTTGAGCGTGAAAAAGCCATTGAGGTTTCATATGGCCGCATTCAGATCAAGGATCTGACCCGCATTACCAGGCTGTCCGGACACGGCGACTACTTCTATTTCTAG
PROTEIN sequence
Length: 232
MADNQALFRENPWLRGLSAATVVTLASKAIVRRLAHGELWVSRSERASGIAIIVEGGLRSTTFTAEGKEYVFSIMKTGDIWGLVSTIDGIHNANDVYAHGETTLLTIDRRTTLATMDSCPDFGRSLMGLLCYRLRMANTVLEDRALKPLEVRLARLLLSLRGNSDVAHNANELQVTQEMLAKILGCTRPTVNKKLLQLEREKAIEVSYGRIQIKDLTRITRLSGHGDYFYF*