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SCN18_30_10_14_R2_B_scaffold_11264_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2563..3213)

Top 3 Functional Annotations

Value Algorithm Source
Repressor protein CI n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEH9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 216.0
  • Bit_score: 329
  • Evalue 1.50e-87
DNA-binding protein {ECO:0000313|EMBL:ESX77780.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 216.0
  • Bit_score: 329
  • Evalue 2.10e-87
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 216.0
  • Bit_score: 326
  • Evalue 3.60e-87

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCTCTCGCATGAACGTGTCTGGGCCGCGATCGACGCGCTTGCGGCGCGATACTCGCTTTCCGCCTCCGGGCTCGCGCGGCGCGCGGGGCTCGATTCCACCGCCTTCAACCGGTCCAAACGCATGTCGGCCGATGGCAGGCCGCGCTGGCCTTCGACGGAATCGCTGGCCAAGATCATCGAGGCGACAGGCTCCTCGCTCGACGAGTTCCTGGCGCTGATCGAAGGGAAGCCGGCTGCCGGCGGCGATGCGCTGCCGAGACAGGTATCGCCCGTGCCGCTGGTCGGCTTCGCGCAGGCCGGTACCGGTGGCTTCTTCGACGATGCCGGCTTTCCCGCCGGCGAGGGCTGGGATCTGATCGAGCTTCCCGGCCGCGCGCCGGAGGGCACCTACGCGCTCGGCATACAGGGCGATTCCATGCTGCCGCTCTACCGCCATGGCGACATACTGATTGTCGATCCGAACGCTCCTGTCCATCGCGGCGACCGGGTCGTCGTCAAGACGACCGGTGGCGAGGTGATGGCCAAGGTGCTGGAGAAGCAGACGACCAAAGCGATCGACCTGCTCTCGCTCAACCCGGAGCATGAAAACCGCACGATCCCGATGATGGAAGTCGCGTGGGTCGCGCGGGTGATCTGCGCGAGCCAGTAA
PROTEIN sequence
Length: 217
MLSHERVWAAIDALAARYSLSASGLARRAGLDSTAFNRSKRMSADGRPRWPSTESLAKIIEATGSSLDEFLALIEGKPAAGGDALPRQVSPVPLVGFAQAGTGGFFDDAGFPAGEGWDLIELPGRAPEGTYALGIQGDSMLPLYRHGDILIVDPNAPVHRGDRVVVKTTGGEVMAKVLEKQTTKAIDLLSLNPEHENRTIPMMEVAWVARVICASQ*