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SCN18_30_10_14_R2_B_scaffold_14895_3

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 485..1000

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXV3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 171.0
  • Bit_score: 326
  • Evalue 1.30e-86
ABC transporter {ECO:0000313|EMBL:EZQ14990.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 171.0
  • Bit_score: 327
  • Evalue 1.10e-86
putative macrolide export ATP-binding protein/permease MacB similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 171.0
  • Bit_score: 314
  • Evalue 1.10e-83

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGACCCTCGGCGACGAGGTGATCTATGATGATGGATGGAAGCTACGCGATCTTCGTGCACTGAGGCGCGATAAGATCGGGTTCGTCTTCCAGGCGCCGTATCTCATCCCATTTCTGGATGTCACCGACAACGTGGCCTTGCTGCCGATGCTGGCGGGCGTTCCCAACACTGAATCGCGCCGTCGCGCGCGCGACCTTCTGAAGGCCCTGGACGTCGAGCATCGCGCGGACGCCATGCCTTCGCAGCTCTCCGGCGGTGAGCAGCAGCGGGTTGCAATCGCCCGCGGATTGGTCAACCGGCCACCGGTGATCCTTGCCGACGAGCCGACTGCACCGCTCGACAGCGTGCGCGCGCTGACTGTGATCCGCATTCTCAACGAAATGGCAGCCAAGTTCGGAACGGCAATCATCGTCGTCACGCACGATGAGAAGATCATCCCGACTTTCAAGCGCATCTACCACATCAGAGATGGCGTGACCCACGAAGAAGCAGGAGAGGGACGCGGCTTTGACTGA
PROTEIN sequence
Length: 172
MTLGDEVIYDDGWKLRDLRALRRDKIGFVFQAPYLIPFLDVTDNVALLPMLAGVPNTESRRRARDLLKALDVEHRADAMPSQLSGGEQQRVAIARGLVNRPPVILADEPTAPLDSVRALTVIRILNEMAAKFGTAIIVVTHDEKIIPTFKRIYHIRDGVTHEEAGEGRGFD*