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SCN18_30_10_14_R2_B_scaffold_15318_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2060..3430)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8K7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 441.0
  • Bit_score: 559
  • Evalue 1.90e-156
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EYR83977.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 441.0
  • Bit_score: 559
  • Evalue 2.70e-156
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 460.0
  • Bit_score: 442
  • Evalue 9.60e-122

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
TGGTACGGCGCTGATGCCCTTGCAGCCATGGGCCCGCCCGACAGACGGGCACTACGTGTCCATATCGACCGCGACATCGCCGCGCTGGACTCTCTCCTGTCGGAGCAGCTTGACGCGATCCTCCATCATGGCGAATTCAAGCGGCTCGAGGACCCTTGGCGCGGTGTTTCCTTTCTCCTCGACCAGGTGGAGGACGATGACAAGGTCATCGTCAGGCTGCTCAGTACGACGTGGAAGGAACTCGGCCGCGATTTCGACAGATCCAGCGAATTCGATCAGAGCGCGCTCTTCGCCAAAATCTACAGCGAAGAATACGGCATGCCAGGTGGTTTGCCCTATGGCTTGCTGCTCTGCGACCATTTTGTCCGCCACCGGCAAGGCGGCGCCGACACCACCGATGACATCGGGATACTCTCCCGACTGGCGGAAGTTGCTGCCGCATCGTTTTCGCCCTGTGTCGTTGGCGCGGCGCCTGAACTATTCGGCGTCTCGACCTTTGCCGATCTTTCGCATGTCCAGCATATCGATGCCGGCTTCCGTCTGGCGGAGTATCAGCGCTGGCGGCGGTTGCAGGAGAAGGAGGAGAGCCGTTTTCTCGGTGTTGCGCTGCCACGGATATTGCTGCGTGGCTTGCGCGACGGGGCTGGCGAAGAGCACGGTGGTTTTGTCTATAGGGAGCGGGCGCTCGGCATCGAGGATTGGCTTTGGGGAAATGCCGCCTACGGCTTCGGCGCCGTCGTCATCCGCGCTTTTCGGGAATCGGGATGGTTCGCCGATATCCGCGGTGCGCGCGAGGGGGTGTTCGGGGCAGGGCGCGTCGAGGGTCTGCCGGCGCCGCTTTTTTCCACCGGAGAGACGGCGGCCTATCGCCGCCCGCTTGAGGTTGAACTGACCGACAGGAAGCAAAAAGTACTGGAAGAGCTTGGTTTCGTGGCCCTCAGCCCATGCGGCTACACGAAGTCCGTCGCGTTCCTCGGCGCGCAGTCGCTCAACGTTCCGCCAGTCGCTGATACCGCGGAGAGCCGGAACGCAAGACTATCCTCGATGCTGCAATATGTGCTTTGCGTCAGCCGGTTCGCCCATTACGTGAAGGTCATCGCGCGCGATCGCGTGGGTGCGTTCACCACCGTGGCGCAACTCCAGAAACTCCTTGGCGACTGGTTGCGAGGCTATATGATCGGCAATTCGGATGCCAGTCATGAACTGAAGGCGCGCTATCCGCTGAGCGGCGGCAGCGTCGAGGTCGCCGAACTGCCGGGGAAGCCTGGATCGATGGCCTGTGTTATACACGTCCAGCCGCATTTCCAATTCGACCAGATCGTGACCGGCATCCAGTTGCGGACGGAGATACAGCCGTCACGGAATATCTAG
PROTEIN sequence
Length: 457
WYGADALAAMGPPDRRALRVHIDRDIAALDSLLSEQLDAILHHGEFKRLEDPWRGVSFLLDQVEDDDKVIVRLLSTTWKELGRDFDRSSEFDQSALFAKIYSEEYGMPGGLPYGLLLCDHFVRHRQGGADTTDDIGILSRLAEVAAASFSPCVVGAAPELFGVSTFADLSHVQHIDAGFRLAEYQRWRRLQEKEESRFLGVALPRILLRGLRDGAGEEHGGFVYRERALGIEDWLWGNAAYGFGAVVIRAFRESGWFADIRGAREGVFGAGRVEGLPAPLFSTGETAAYRRPLEVELTDRKQKVLEELGFVALSPCGYTKSVAFLGAQSLNVPPVADTAESRNARLSSMLQYVLCVSRFAHYVKVIARDRVGAFTTVAQLQKLLGDWLRGYMIGNSDASHELKARYPLSGGSVEVAELPGKPGSMACVIHVQPHFQFDQIVTGIQLRTEIQPSRNI*