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SCN18_30_10_14_R2_B_scaffold_16717_6

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(4673..5086)

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 135.0
  • Bit_score: 180
  • Evalue 1.00e-42
Porphobilinogen deaminase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N3S6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 135.0
  • Bit_score: 180
  • Evalue 7.20e-43
hemC; porphobilinogen deaminase similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 136.0
  • Bit_score: 169
  • Evalue 6.10e-40

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
GCTGCGGGCCTGTCACGGTCCGGGCTCGCCGGGCGCATCACCGAAATGCTCGATCCGGAGAAATTCCCGCCGGCGCCGGGGCAGGGCGCAATCTGCATCGAGGCGAAGATCGCCAACCGGCGCGTCGCCGAAATGATCGCGCCGATCCATGACTGCCCGACCGGGCAAGCACTTGCCTGTGAACGCGGCTTCCTCGCCGTGCTCGACGGTTCCTGCCGGACGCCGATAGCAGGCCTTGCCGGGATCGACGGTGACCGGCTGGATTTCCACGGCATGGTGCTGACGCCGGACGGTCGCGAATGCCACCAGATTTCGCGCAAAGGCAGCGCGGCGGACGCGGAGACGATCGGCCGCGAGGCCGGCACAATAATCCGCGACAAGGCCGGCGCCCGCTTCTTCGACAGTTGGGTGTAG
PROTEIN sequence
Length: 138
AAGLSRSGLAGRITEMLDPEKFPPAPGQGAICIEAKIANRRVAEMIAPIHDCPTGQALACERGFLAVLDGSCRTPIAGLAGIDGDRLDFHGMVLTPDGRECHQISRKGSAADAETIGREAGTIIRDKAGARFFDSWV*